LOCUS       AMU95291.1               882 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-2321
PROTEIN_ID  AMU95291.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_11805"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003050885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSTRFILTGS RARMLCGSAI FAVMLGAATA AQAQGAGAND AVEDSAAGSD SEIIVTGSSI
       61 RGIPPTGSGL ISVSRDDAKL IGAASTPELL ATVPQLNSFN TAPRTSNGGL GSFAPGLRGL
      121 PPAATLPLMN GHRLISGSTQ QTNPDYPFLP ELAIERVEIV ADGASAIYGS DAVAGVVNFI
      181 TRKRVSGFEA NVRYGFADDY HAFNAGAIFG HAWDSGSFVA AYQYSENSNI TGADRRYRSL
      241 DFRAAGGIDT RSTVCPDANV NLFTGTIYAA PSLTPGINTC DPRGPVDLVP QNRTHSLFVS
      301 ARQELSSAVT VWADLLYSDR KDIVQAALPG QTFVLLTAAN PFFRPPPGTG TTYEYVDFRP
      361 DNLVGDDHFD QSYRVRTGNA TAGLDVKLAG DFKASVYGTF NWSRNDTFQP GINTTALATA
      421 AAGTTAATAL DPFRTGTSSA VVAAILDNPT DFTNHQRTRI GAVKVDGPLA DLPGGAIKVA
      481 LGAEYRRETY DQRGSSGGVG FPEDLKRSVQ SLYGELFVPI VGEGNASPMM RSLTLSLSGR
      541 YDHYSDFGST TNPKVGLTWE PVEGLNFRGS YGRSFRAPGL RDLGSTVGSY YAAAALVDAF
      601 GARDPSRGAT QVNTILLYGG NQALKPEKAR TFSFGVDLRP RLAPDFSASA TFYDIKYDDV
      661 IGTPSGLGAI LFSDPTFASR VIRNPTAGQL TDAITDTVPF FYTFAAIPTI GNILDLRQGN
      721 FGIRKTNGID FDLRYRHTAG FGTLFGGIAG NYILKYRNQL SPTSAVSNSL EAGIPRTTLR
      781 TTLGIAAGPV TLANFVNHRS GVTAAYATPT GSSLYKAKGY TTVDLRLSLK LPDLPFAKGT
      841 EVALQINDLF DKTPPFFPGT DGIGGAYNAI GRYAAMSLRT SF
//