LOCUS       AMU95268.1               937 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 DNA polymerase
            I protein.
ACCESSION   CP013342-2297
PROTEIN_ID  AMU95268.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_11685"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003048971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSQKNHLYLV DGSSYIFRAY HRLPPLTNPN GVPVGAVYGY TTMLWKLAKD LHDADGPTHL
       61 AVILDHSSQS FRNEIYDQYK ANRPEPPEDL RPQFPLIRDA TRAFSLPCIE MEGYEADDLI
      121 ASYAEAAVRE GWDVTIVSSD KDLMQLIREP ADGPHVDMLD TMKNVRLGID AVHEKFGVSP
      181 DLVGDVLALM GDSVDNVPGV RGVGPKTATK LIQEYGNLTA ALDGAETMKA SKLRENLIEH
      241 RAMAELSRVL VDLKRDCPLP DTLDSLKLDA IPPAPLKLFL DEHGFRSLSA KLDNGVAPGG
      301 PPTLPRAGAA PAAAAPTGPT TPVLPAMPAI DRAAYECVTD LDALDRWIAA AKAAHVVAID
      361 TETASLDSVT GELVGVSMAI APGQACYIPL GHGGTDMFAE KPHQIAMADA IARLGALFAD
      421 DAVLKVGHNL KYDIGVLAQH GVRVAPCDDT LLMSFALDAG QHGHGLDELA KLHLDHVCLS
      481 FKEVCGTGKS QISFAEVPLA RATEYAAEDA DVALRLWRLL KLRLPLEGGT RVYEMVDRPL
      541 AGVVETMERA GIMVDRDYLA RLSGEFAQEM ARMETAIHAE AGQPFTIGSP KQLGEILFDK
      601 LGLKGGRKGK SGDWSTDQNE LERLERDGVP IARMILEWRQ LAKLKSTYTD ALQQQINAKT
      661 GRVHTSYSLV GAQTGRLSST DPNLQNIPIR SEIGRQIRDA FIAAPGHVLI AADYSQIELR
      721 LAAHMADVPE LKEAFAQGQD IHAATAIELF GEVNRDTRAK AKTVNFSILY GISRWGLAGR
      781 LEITPDEAQA LISRYFERFP GISDYIQGTL ERARERGYTE TLFGRKTWFP RIKAANQNER
      841 QGSERAAINA PIQGTSADLI KRAMTRMPVA LAEAGLDEVK MLLQVHDELV FEAPEDKAEA
      901 AGAVIRRVMA AAAEPVLTLS VPLEVEVGTG KSWGDAH
//