LOCUS AMU95212.1 654 aa PRT BCT 21-JUN-2016
DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 acetyl-coenzyme
A synthetase protein.
ACCESSION CP013342-2241
PROTEIN_ID AMU95212.1
SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098
ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098
Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
Sphingomonadaceae; Sphingopyxis.
REFERENCE 1 (bases 1 to 3979087)
AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
111660), a Polyethylene Glycol Degrader
JOURNAL Genome Announc 4 (3) (2016)
PUBMED 27284143
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 3979087)
AUTHORS Yoshiyuki,O.
TITLE Direct Submission
JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Annotation was conducted using PGAP and MiGAP, and PGAP annotation
was curated by referencing to the MiGAP annotation with the aid of
annotation support tool of GenomeMatcher software.
##Genome-Assembly-Data-START##
Assembly Method :: newbler v. 2.8
Genome Coverage :: 110x
Sequencing Technology :: Illumina MiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 11/30/2015 14:33:14
Annotation Pipeline :: NCBI Prokaryotic Genome Annotation
Pipeline
Annotation Method :: Best-placed reference protein set;
GeneMarkS+
Annotation Software revision :: 3.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes :: 3,797
CDS :: 3,699
Pseudo Genes :: 49
rRNAs :: 1, 1, 1 (5S, 16S, 23S)
complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)
tRNAs :: 45
ncRNAs :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
/mol_type="genomic DNA"
/strain="203-1"
/sub_species="terrae"
/culture_collection="NBRC:15098"
/type_material="type strain of Sphingomonas terrae"
/db_xref="taxon:1219058"
/geo_loc_name="Japan: Kyoto"
/collection_date="1974"
protein /locus_tag="AOA14_11405"
/EC_number="6.2.1.1"
/inference="EXISTENCE: similar to AA
sequence:RefSeq:WP_003052757.1"
/note="Acs; catalyzes the conversion of acetate and CoA to
acetyl-CoA; Derived by automated computational analysis
using gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MSELPPSEPF VPVPADAAAN THCSAADYDR LYAASIDDPD GFWADQAQRI DWMTPPTKIA
61 GWSYDPVSIK WYEDGVLNLC HNALDRHVAA GHGMRTAIIF EPDAPDGEVR HISYAALLAD
121 TIRMANTLKK MGVRKGDRVT IYMPMIPEGA MAMLACARIG AIHSVIFGGF SPEAIHGRIE
181 DCGSDWVICA DEGLRGGKTI PLKANVDKAL ERVDVKGVLV IAHTGGDVAM REGRDHWYDA
241 LSADVSADCP CEPMGAEDPL FILYTSGSTG KPKGVLHTVG GYSVWTASTF WYGFDYRPGE
301 IFWCTADIGW VTGHSYVVYG PLQNGATTLM FEGVPNYPDH DRFWQVVDKH RVNILYTAPT
361 AIRALMREGD DYVTRHDLST LRLLGSVGEP INPEAWRWYH QLVGKGRIPV VDTWWQTETG
421 GIMITTLPGA HPMQPGSAGR PFFGVRPQLV DADGAVLADE QVGGATEGNL CITHSWPGQA
481 RTVYGDHDRF IQTYFSTYKG KYFTGDGCRR DAEGYWRITG RVDDVINVSG HRMGTAEVES
541 ALVLHDLVAE AAVVGFPHDI KGQGIYAYVT LNAGVEPTEE IAAALRQQVR TEIGPIATPD
601 HIHLTPALPK TRSGKIMRRI LRKIAENDFG SLGDTSTLAD PSLVDGLIEG RKNR
//