LOCUS       AMU95188.1               952 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-2217
PROTEIN_ID  AMU95188.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_11285"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_017499397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MKVQQQVDNR ALRAALLAGV GPLLLLAAPA AAQDATGSAE GAATDDDAIV VTGIRETIQN
       61 SISVKRRETA IVDALSADDI GDLPALSVGQ AIQTITGATT HREKGDASEI ALRGLGPFLS
      121 NATFNGRDAT NGSGDRSVNF NQFPSELVNN IKIYKTQQAN LVEGGVAGTI EIGTLRPLDF
      181 GKRRIQGEIK GQYNPYGNRI VGSGGTGWRG TLSYVDQFAN DTIGISIGFQ RNDTNNPEET
      241 YAASTTWSAC RADIVVTNNN CTELAREDYG SDIPYYLVPN SYIFRQISET DQRDAAFGAI
      301 QWRPSERINV NLDVQYSDRT YVESRRDLTL SEARRSLVNV EYDANGIVRH LEGQSSLESN
      361 GSELSRSEEY LGGGLSVEWK PNDRLTLTAD GSYSRTIRKE IERNFRLRTD PTDVNGVRTV
      421 FNNMRIPYTY DLAPGSFVPT ITIDPRFDLD NHDLFWDDAR FRRDEAKRRN EIVAGRVDAI
      481 YEMDGFLRSI SAGARWARLT YRDYDVRNGD FNQNPARTED QRINNLCRQA FPQRDYLTAA
      541 DGNDIHSWAT FDVDCLFREY LGTEDPGLPD DIRSVANRDV TERTLAGYVM AEYEGDLGNL
      601 PVRGNFGVRV VKTDVTSNGL RSDLVIVDNG DGTIRLDDSG EFDTVTIKSG TTRILPSVNA
      661 IFEVAPNMLL RLAGYRAMSR PAPSALGAGR TFTLEDGGSF TSVQDAIENA RANGSPRLKP
      721 LMSWNADAAI EWYPNKDSLL SATVYYKQFT GGFQPVVYDE SFTVDGQDVI VPVIQTRNSP
      781 DKSRIYGIEL TAATRFSFLP KPLDGLGAKV SYNYADANFE NQDVRLGDVY DPETETVSPG
      841 LIAPAGLSGY SKHVLSAQAY YEIGPVSLQA IYNYRSKYYQ DFVGGNSQLR YVGPSETVDF
      901 RASLALMRGV SLRFEAINIF NEPKATYMPV YGSSRQYHYY GSKYFIGIRA RI
//