LOCUS       AMU95182.1              1011 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-2211
PROTEIN_ID  AMU95182.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_11255"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_013754666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MRDYVGLRRK ARASRLVTAW VSGVALCALL APASALAQEQ VQSDDAADDN AIVVTGIRSS
       61 LQSALTEKRN ADNLIEVIQA EDIGKLPDQN LAEVLENITG VQITREAGVG TGVQIRGTND
      121 NRVEINGVST VGSGSGRGGI SFEDVSASII ASVEVTKAPE AKTIEGSVGG TINLRTIRPL
      181 DLKEMLLAAR VQGEHSELSK SVRPRISATF GDKWSTGIGQ IGLVVSGSYT QQEATSFRPR
      241 VDRDGGLVEN VNATVVRSGV AENQPTRRPA AQDFDFVGIQ FLNQELENFE YETKNFAGTL
      301 EWAPSDHVKF YFDTIYNDQQ RRQDSSRVQG SGVNALLDYS VPTSFQTVDF GSLDGVKLGS
      361 IRVAETGTIE PNIAVDRDDP NLRFSSDVGA RLTKSEIYRL GSEFDAGRLT GRVEASRSIS
      421 NTRNPDLSTT LNFLNPNAPV FTGNDNAVPF IYDLSGGSLA FGINFDSPFA PTVEQLLDPA
      481 NVVLQQVSIG NDSTRNKEDA ARIDLSLDVA DLTPFFTSFD VGYRFNRSSS TFNDVGSTLT
      541 LSSLNDSPRG TLFADLLVRG PNNFGDADGR TLFFKDFLLI DPNRAFSDRE GTLDILRAAL
      601 LAAPGQRALN DASANSAGYF SINETTNAVY GQANFEIGPV RGNFGLRWLD TSLDSIGNSI
      661 TGANVTQVVT RGGYSKLLPR LNLVADVADN ILLRASWGRD INRPDFDLLS TSVSFVTSEN
      721 AAVSIGNPNL RPETVTSYDA SIDWYFAPSS VLSVGVFHKK RTDLFVTQLE DAPLDANGYR
      781 DITAPCEGGG IYNPIGFRNQ LSPIGGSGMC VPILTTINDS GSTTQTGVEV ALQYDLSQFE
      841 ETLGFASGFG IVANYTYQKF GGGQAVNSSA TRGTDIFNAI NGIYDDADFV PVTAKQGLLD
      901 FSKHAYNLTL YYEKYGLSAR ARYTWRSAFR TLDTVGGATL ASTFGFPVVT AARGQLNASI
      961 SYDINSFLSV GVEGVNLSKS KISQYCVNDG ALLCFEGLPD RRITFGASVR F
//