LOCUS AMU95151.1 747 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-2180 PROTEIN_ID AMU95151.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_11090" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003039946.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MKARHSNLLA GVATLAMLAT AAPAMAQTAD DGADTSAEAS GSGNEIIVTA QKRAQNIQDV 61 PISMEVVSGQ RLDDFNSNDI KAVMNYTPNV FVQSTAGNDV IYIRGFGSPP ANFAFDQSVS 121 LYVDGVYAGR SRQAQAPFFD LARVEVLRGP QGALFGKNTA AGAVSVVSAG PTDQFEGKLT 181 ANYNFDFKGT DFSGYLSGPL TDTLSARLAM KVLNQQGYIR NLATDHDDPE IKQQLLRLTM 241 KWEPSANFDY TAKVEYANRD VVGGITVSSP LTSAQDPHLT RYLDKSALGD EGTKTKSVMI 301 SGTGNIAIGD YTLTSVTGYS WFNANIVNGF DQTIPGGGGA FTNNSVYNSF PERFEQFSQE 361 IRVLSPTGRT FDFIVGAYYD HGKYRLDQLQ GFNIANLFGS PYFGRIDSRF NQTSDSWSLF 421 GQGTLNLADT FRVIGSLRYS HTSKDADFAS RLVYGPFAIR PISSAVGSLS EGNVDPSVTV 481 QFDVAPRIML YATYGRGSKS GGFVSNTLGT TNATFAFKPE RSTNYEAGVK STLFDGKVVA 541 NVSVYDTQFK NLQVSVYQPA TSSYLTGNAA SATSKGIEGS LALYLSPNLD ITASGAYQDI 601 KYDDYPGAAC LASQPSTCTP ATNNLAGYRL AYTSKWTGNV SAHGRVPLGD DLKLDITGVA 661 AGRSKYFDSD NQSPIFGIQK GYVKLDLRVQ LSDADERWFL AFVGKNLTNE LTTGSAFNLP 721 APITAVPRAI LYLEPPRNLS IEAGFKF //