LOCUS AMU95124.1 995 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 beta-phosphoglucomutase protein. ACCESSION CP013342-2153 PROTEIN_ID AMU95124.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_10955" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003049415.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MERAPAERAP RVRMTVAISS AASDTMRLVR HGGDAVGDQA AALFALANGL VGVEGVADEC 61 AAAPCAYLPG AYVSRPIDYH ESFPGYATAT DTRIKCPSPV ALRLRIDGAP VDFAAADRLE 121 AESLLDLAWG QLRRRTRWRL ADGRTIEIAA VRIVPLDGDA CVATRLSVSP VDFAATIEID 181 LIFGTDADGG NADAADDPRI SGRLRPVWTV QPSEPGDTPS VVRFAQGAVE LAYRQRVASL 241 DAPVVRIDGG HMVRGALVAG GTLSVDRVVA MTCTRGHPVD IDALPEPQPF DAIAAAQQRA 301 VDQLWAHADF AIAGDDALTQ ALRFDLFQLH QSASRDPDHS IAAKGLSGEG YEGHYFWDAE 361 SFMLPVLALQ MPDRARTLLQ YRIGKLAAAR AHARGIGHAR GALYPWRTIG GAECSSHYPT 421 GSAQYHINGD IAHGVALYVA ATGDSDVRRA AAEMLFETAR IWPEIGAFDP RRGGAFCIYG 481 VTGPDEYSAL VDNDYYTNAI AARHLAYAAD TADWLAHTDP AAFAALAQAI GLDAEEVAMW 541 RRAAEAMWLP VDAEAGVSPQ DDAFLGRPKL ADLAPLDERG PLLMRYHPMI LFRHQIAKQG 601 NVLQAMAMDL VSLPLALQRR NFDYYSRVTA HDSTLSSVAF AIVAARLGED GEALDFHREA 661 AFVDLENRHG NTSHGLHMAA LAGSWLVLAH GWGGLWLGGD CPAFAPRIPA GWARYHFRLM 721 WRGSVIEVAV DAEGATYRRL SGAPVDIVDH GRPVRLADAA VRMARPAVQG VIFDLDGVLT 781 DTAEDHYHAW QALADQYGYA FDRAANDRLK GVDRAGSLRL ILDGAGASVD DARFEAMLAE 841 KNALYRARLA AYSPANLFDG VRALFAALRS AGIKIGLASA SRNAGHVVRL LGIADQFDFI 901 ADAGAIAANK PAPDIFLACA DGMGLPPERC IGIEDAQAGI SAIHAAGMVA IGIGSEEALP 961 DADVHVPAIG ALSVDQILSA EREAASAGNL SKKTG //