LOCUS       AMU95041.1              1004 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 isoleucine-
            -tRNA ligase protein.
ACCESSION   CP013342-2069
PROTEIN_ID  AMU95041.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /gene="ileS"
                     /locus_tag="AOA14_10530"
                     /EC_number="6.1.1.5"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003040964.1"
                     /note="IleRS; catalyzes the formation of
                     isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since
                     isoleucine and other amino acids such as valine are
                     similar, there are additional editing function in this
                     enzyme; one is involved in hydrolysis of activated
                     valine-AMP and the other is involved in deacylation of
                     mischarged Val-tRNA(Ile); there are two active sites, one
                     for aminoacylation and one for editing; class-I
                     aminoacyl-tRNA synthetase family; some organisms carry two
                     different copies of this enzyme; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MTDSTSAPDQ RDYRDTVFLP KTDFPMKAGL PQKEPLILAK WLESNLEAQI REARRGRDQF
       61 ILHDGPPYAN GDMHIGHALN HILKDMVVRT QTLKGKDAPY VPGWDCHGLP IEWKVEEQYR
      121 KKKLNKDEVP VEEFRAECRA YAQHWVDTQR EQLKRLGIGG DWDHPYLTMD YEAEATIVRE
      181 LLKFAANDML YRGAKPVMWS PVEKTALAEA EVEYEDIVST QIDVAFEIVE SPIAELVGAH
      241 AVIWTTTPWT IPVNQALAYG PEVEYVLVAT ARGQAKMLNP GDPMPLVEDL KYLVAAPLLD
      301 EFHKRIKHSV HGFAPGTVVK TIKGSDLAGT IARHPMHALG GFFARPRPFL AGDFVTTDSG
      361 TGLVHMSPDH GEDDFDLCKA NGLDPVFAVE GDGKYREDWG WLGGQGSVIN PKFNAPDGPI
      421 CSDLREAGAL LAASADYKHS YPHSWRSKAK IIFRCTPQWF VPMDKVMTHI EPKTRSERRW
      481 EGEGGAINPA EEGLCDAPTL RQAAMQAIDD TRFVPAKGRN RIGSMVEGRP DWVLSRQRAW
      541 GVPITLFVDR KTGQYLNDPL VNDRIVAAVK EAGVDAWSDA RAQEYLGDSY NAADYERITD
      601 ILDVWFDSGC THAFVLESGR WPALIRHDGG THSADLYLEG SDQHRGWFQS SLLESCGTRG
      661 QAPYKAVLTH GFTMDAKGFK MSKSLGNTIS PIDLMRDYGA DILRLWALSV DFTEDHRIGK
      721 EILAGVADQY RKLRNTFRYL LGALDGFTEE ERITDVAAMP ELERYMLSLL ADLDAKLRQA
      781 VDDFDYNAYT RLLADFCNED LSAFYFDIRK DVLYCDLGPA APLGTDTRRA YRSVLDVLFH
      841 ALVRYAAPVL VFTSEEVWGT RYPDAGSVHL LEWPDFAALL RHPCEGGGPA SNDGEKLDSR
      901 LRGNDELIEK WAQIRGTRAL VTERIEPLRR EKTIRSSLEA EVWLPSEAGD VDYEEIFITS
      961 TVHQGDWDVK RTENHKCGRC WRHLPEVTAD GALCNRCETV LDAQ
//