LOCUS       AMU95007.1              1944 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 alpha-2-macroglobulin
            protein.
ACCESSION   CP013342-2035
PROTEIN_ID  AMU95007.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_10360"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003041067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTGWRGLANR LAGKMRFALI VPVAVALAAA GGDTVPQVTL ATPSSAGNGD GTISRFTLRF
       61 SEDMVPLGDP RAKAPATNDC KVPSTGRWVD TRTWVLEFAK SLPGGVSCHV ELRADLRTAR
      121 GVSVVGNDRF EIDTGGPSAR AVLSGDRYDG IEEDQIFLVA TNVAADRASV GRYGYCAVDG
      181 IGEKIPLDVL PRETTTEILT GVGDGDWRRQ QFSYDAGLPL RLPAAGADRE AMLDRIVPVK
      241 CRRPLPPGRE MALVWDARIA QLGAPSRTAG RDQRFDYDVR PVFTAKMACS RVNPQAGCNP
      301 IKDVVLSFAA PVARAAALAA TLKTSDGKQL TPKASDDDKN DAWLTQVRFA GPLPQNVDAT
      361 IVLPADIRDQ SGRALQNQSN FPLKFHIDRA PPLVKFAADF GILEASEGGV LPVTVRGVEA
      421 SLVQRGLKMP AATLRVGDDD AAVARWLKRV EDAGKTDFRD EKNAKGEDIS VNYTGTTSVF
      481 DGAPAGGERR DLQLTPPGGG KEFEVVGIPL AEKGFHVVEI ASPELGAALL GRKATRYVAT
      541 AALVTNMAVH FKWGRESSLA WVTALDTGLP VGGADVRITD SCTGRLLARG TADKAGRLAF
      601 PTGLPEPETY SSCEEDADPA NSEGHALMVS ARSGDDYSFT LTDWGDGIRP YDFDLPYGWS
      661 ERDDLLHTLF DRSLVKAGET VNMKHVLRRQ VGQGFAIPEA MTGKLRLVHR GSDTEFDMPF
      721 AIDANGSGEN VWNVPASAPM GDYDLVFVTK DKKGEEKTIW SSESIRVDEY RLPTMKAAIT
      781 GPKTASVRPT QVPLSLFVGY LSGGPAANLP IEIRTDFTPR WSPPEDYRDW DFDGKPVKEG
      841 IVQLDDSGDE PEPDMPLARS TPLVLDANGS AQTSITVDQP IVEPTQMAVE MDYEDANGET
      901 LTSRRGIMLY PSAVRLGLKT DGWLMRDNDL RLKFIALDLD GKPIAGQRIQ VALYNREILT
      961 ARRRLIGGFY AYDNQMRTTR LGTSCTATTD KLGRASCAMA PGVSGEVTVV ATTVDADGNE
     1021 ARAVRSVWLA GDDDWWFGGD NGDRMDVIAE KPRYAAGDTA VFQVRMPFRE ATGLVTVERE
     1081 GVLSSFVVPL KGTDPIVKVK LPATYAPDVY VSVMAVRGRV TGGESWFRKM KRAVGFKIEN
     1141 SEGAPPTALV DLAKPSYRLG IARIKVGWEG HQLDVKVKAD KAKYAIRDNA KVAIEVRTPN
     1201 GKPAAGADVA FAAVDEALLQ LSPNKSWELL DAMMGERPLD VLTSTAQMQV VGKRHYGRKA
     1261 LAPGGGGGGD LSGLTREDFR PVLLWKGHVA LDSKGRAVVD VPLSDNLSAF RLVAIATDGA
     1321 QYFGTGETSV RTVQDLGVFA GLPDLVRTGD TYDARFTLRN GTDQPMEVVA NATLSPAIAT
     1381 APPLTVTIPA GGAVPISWSM TAPAQPGPLQ WTVEAVSKNG KQRDRLVFDQ QVEPAVPIET
     1441 WAASLVRVGS TSSLPIGVPA GALPGGYVDV TLAGTLAPPL AGVRDYMAIY PYNCFEQSTS
     1501 RAIALGDLGR WQAQAGALPT YLDKDGLLRY WPNDRLDGSA ELTAYVMAVT AANGFAIPEE
     1561 PKARMIKALQ AVVEGRLTRR GYGPYDLRPV RIAALAALAR NNASSAQLVA AIDVKPVDMA
     1621 TGTLADWLVA IERTPGVRGA AALRTAAEAE LRKRLVYEGT RLDLVDDAKA PWWMMTSGDE
     1681 MAIKALEAVL GRKGWEEDTG KMMVGVAQRQ RRGHWDTTPA NAWGAIAVRR FAELNPASAI
     1741 TGVTRIALGG GSAAQTWSLP ADAAPLSLPL VSGTMSLKQE GTGNPWATVS VRAAVPLKEP
     1801 LDAGYRIKRS VSIVKAANKD RLTRGDVIKV RIEIVASAGR TWVVVNDPVP PGATIVGNLG
     1861 GQSEMLGAQA TVSNWQPSYV ERGRDSWRGY YGWMPAGTHA VEYVLRLNGS GRFTLPPTRV
     1921 EAMYSPAIRG QWPNGAMTVA AAAQ
//