LOCUS AMU95002.1 961 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 peptidase M16 protein. ACCESSION CP013342-2030 PROTEIN_ID AMU95002.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_10335" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003041078.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTRFHRFAVA LAVSTSLVAA GPALAKAKEA QPAPISELVK AVDIPYQSFT LDNGLRVIVH 61 EDHKAPVVAV SVWYRVGSKH EPAGKTGFAH LFEHLMFNGS ENSPGDFFEP LQQVGATDFN 121 GTTNTDRTNY FETVPTGALD RALFLESDRM GHLLGAVTQE KLDNQRGVVQ NEKRQGDNNP 181 YGLLRYEIFE NLFPKGHPYH HSTIGSMTDL NTASLADVKK WFSDNYGPNN AVLVLAGDID 241 LATAKTKVAE WFGDIPRGPE VKAPQTSVPT LPAPLAKEVK DLIPTTRIYR MWAIPGLNDP 301 ESVPLQMATA VLGGLSSSRL DNALVRKDPV AVSVAAFAQT LEDAGFLIVQ ADVKPGVDPK 361 VVGEKLDAQI ADFLATGPTA DELQRAAASY LGGTISGLES VGGFGGKAVT LAEGALYSND 421 PAYYKTELDR LAKVTPEQAK AVADKWMSRP AFSLTYSPGE RTEGGENRGG AFTEGKPVTA 481 VSPDRYWNAA LGDVGPDTGV GTATSIADRS QLPAVMDLKA LEFPAIERAK LKNGMEVVFA 541 RRTAVPTVQV AVSFDAGYAA DPHNALGTQS LMLSLMDEGT TSKDSIAFAE AKERLGAQID 601 GSANADETVF SLFALKPNLS ASLGLLADYI RNPAFDGKEM ERVRAQQLNR LNAELNNPNA 661 IASRVLMPVL YGADHPYGIP PSGLGNEAAV KAATRDQLAA FHQTWIRPDN ARIFVVGDTT 721 LKDVTKQLDA AFGDWKAPKT AKPEKHFEIA IPKPQPRILL VDRPKSPQSI IIAGKVLDVK 781 GGDDLEVLRQ ANDIFGGSFL SRFNMNLRET KGWSYGVRSR VSGEADRVTW VAVAPVQADR 841 TGDSIREFQK ELTAFIGDKG VNAEELERTT NGSVRELPGS FETSGDVLGG LRAIVKYHRP 901 DNYYETLPAK YEAMTAEELD AAARKEVSTG DLVYVVVGDA AVVKPQLDGL GLPVETAKPA 961 N //