LOCUS       AMU94994.1              1062 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-2022
PROTEIN_ID  AMU94994.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_10295"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003041096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MKKTHYSKLK LGAAPIVIGV ALASVPAFAQ DAEEGAAAPG SEIVVTGTLI RNPNLEQSTP
       61 VNVTTSDAIE LKQSNVAEEV LRELPGVVPN IGSAVNNGNG GASYVDLRGL GSTRNIVLLN
      121 GNRVAPSDVN GRVDLNNIPL ALIERVDALT GAAVTTYGAD AITGVVNFVT KRDFAGFEMT
      181 ASEQITEKGD GNIFRVDATI GANFDDGRGN AVLSIGYQQA DPVYQGARGF SDNTLDSYSD
      241 TFIGSGTSVP SRFSGTRPLT GGVPNVLAQY TQTGTVPNPN FDPTQPVSAT NPATLPVLAL
      301 TPGGAANGGV RQVNSAGQAV GTFQTYNFNP FNIFQTPFER FNIYGQANYE VSDAVEVYTR
      361 GMFSKNTVST IIAPSGSFGG SVAINLNNPN LPAALRDQFC AFNVAPVVNG VDANGDPISG
      421 QSAYTPRFTP AECAAAATAT GRSDPNYREV TVTLNRRTPE VGPRISNYQT TFFDYRVGAR
      481 GGITDTLDWS LEGAYGESEN IQSINGYTLQ SRFREASLSN DGVTCQSGNA DCVPVNLFGP
      541 EGSITPEAAR YLSEKSTSTN RTSLAQVRGI ISGDLGFSSP GAVQPIGFAI GGEYRKYTAQ
      601 QSSDLLAKTP GELGGAGGAA PDIDGAYDVY EAYAEIVAPL IEDKPFFESL TLEAGIRYSD
      661 YSIRGAGGYN ATTWKAGGSW EPGAGLKLRG NYSRAVRAPN IGELFTPQTV GLTNLGIDPC
      721 AGGAPVADAN LRAVCIAQGA PAGTIGSITN PTAAQANITV GGNLNLKPEK ADTWTLGLVW
      781 QPDFLPRFNM SVDYYNIKVN DVLGTPLPGD IINACFDGLS ASSATDPACT SIRRNPITGG
      841 LDGDPSTTPG LFGLTNNLGR LFTDGVDLLM NYNTDVGFAN LSWSFVGNWT HSSKYNANVA
      901 DPTSLNRECV GYYSVNCSFT GSIQPEFQFS QRFTLGFDKV DVSLLWRWMD SVDFEPAQLA
      961 ADIAAAQAAP DDCPNPTTSD DGGCVVDPKF RHIKAAHYFD LATRFNVSDN LVITMTVQNL
     1021 LDKKPPIVGN TIGSTTYNSG NTFPSTYDAL GRRYAISAKL KF
//