LOCUS AMU94915.1 889 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 phosphoenolpyruvate carboxylase protein. ACCESSION CP013342-1943 PROTEIN_ID AMU94915.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_09895" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003041319.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MGPPIQISQN PDIRYLGRIL GDVIRAYGGE KLFRQTEYIR SSSVDRHRGI AGAETIDPGL 61 EALSLDDTIA FVRGFMLFSM LANLAEDRQG VAAEPEATVA AALARLKQDG IDGDAVAALL 121 GAALVAPVLT AHPTEVRRKS MLDHKNRIAE LMRLRDAGVE ETAEGDVVEE AIRRQIVLLW 181 QTRPLRTEKL FVADEIDNAL TYLRDVFVPV IPKLYARWEQ ELGARPASFL RVGSWIGGDR 241 DGNPFVTAET LHMATSRNAA AVLGHYIDAV HALGAELSVS SSLATVSEAV EALAAASGDT 301 APSRSDEPYR RALSGIYARL CATYAGIVGR APPRPSALAG DAYAAPADFR RDLVTIAAGL 361 SASGEGQLGG IGALGRLIRA VEVFGFHLAT LDMRQNSAVH ERVLAELLAV AGVEGDYLSL 421 GEEARVELLR RELATNRPLA APWHKWSEET AGELAIVHAA AAIRARLGVE AIVQWIISKA 481 ESLSDLLEVH VLAREAGLWS AEAQDNLMVV PLFETIADLD EAPGIMAAYF ALPEIAPHVV 541 ARGHQEVMIG YSDSNKDGGY LTSTWGLYQA SEALTPVFEA ADTAMQLFHG RGGAVGRGGG 601 SAFAAIRAQP AGTVQGRIRI TEQGEVIAAK YGTADSAATN LEAMVSASLL ASLEPEAMSA 661 DDAGRFAGAM TALSNDAFAA YRGLVYDTPA FKDFFRAMTP IAEIATLKIG SRPSSRTKST 721 AIEDLRAIPW VFSWAQARTM LPGWYGTGEA FAAFADQALL ADMAQSWPFF GALLGNMEMV 781 LAKSDIGIAA RYAELAGDVG GHAAIFSRIR DGWHRAHDGL LTITGQSRLL ENNPALEASI 841 RLRLPYIEPL NLLQIELMKR HRAGETDPRI AEGIQLTINA IATALRNSG //