LOCUS       AMU94885.1              1094 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 DNA polymerase
            protein.
ACCESSION   CP013342-1913
PROTEIN_ID  AMU94885.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_09745"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003041416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSAPCPDADP GFAELIAATN YSFLRGASHP AEMVARALEL GMTGIGIADR NSVAGVVRAW
       61 AFLKELQIKQ PEAVARFRLV VGARLAFADG TPDIVAYPVS RHGWGRLTRL LSTGNLRAQK
      121 GDCILHLEDL LAYCDDLLLI ATEGDETLLR QLKHARPKSL WLAATMPRGG ADARRLARLH
      181 RLAAAVNVPL LATCDALYAT PAQRPLHDIV TCIREGTTLH RAGRRLHANG ERHLKAPAEM
      241 RRLFAACPGA VEQSARLLDR IGFALDELRY EYPHEPVPPG WKPFNYLHHL VKTAAEARYG
      301 TPLSAKVRKL IGNELRLIRR RNYVYYFLTV HDLVRFARAQ EPPILCQGRG SAANSIVCFL
      361 LGVTSVDPMQ HDLLFSRFVS AERDEPPDID VDFEHERREE VIQYIYRRYT RDRAAIAATV
      421 IHYRPRSTIR EVGKALGLSE DVTARLADTS WGSWGDEVPV ERLAEAGLDP HNGEIERLHR
      481 FVGELLKAPR HLSQHVGGFV LTQGRLDELV PIHNAAMEDR TFIEWDKDDI DALGLMKVDV
      541 LALGMLTCIR KCFDLMRAHG LGDHTLEVDI DCGDEAVYEM LQRGDSIGVF QVESRAQINM
      601 LPRLKPRIFY DLVVQVAIVR PGPIEGDMVH PYLRRRCGEE PVEFPEPAPP HPPDELHDVL
      661 GKTFGVPLFQ EQAMKLAMVA ADFTPDEANG LRRAMATFRN VGTIENFRDK MIGGMVRRGY
      721 TQDFAERCFK QIEGFGSYGF PESHAQSFAR LVYVSSWIKH YHPAVFTCGL LNSQPMGFYA
      781 PAQLVRDARE HGVEVRAVDV NSSDWDSSLE PRADGSLALR LGFRQVDGFR QEWAKLIADA
      841 RNAAPFASVE ELARRANLPP RALRLLADAD ACRSMGLDRR PALWDARRVR QGVLPLFGAA
      901 GADELGTEDD ARLPPIPPVE QVLTDYQTTR LSLKGHPMAF LRPAFAREGV LSAGEVAGAK
      961 NGSIVCTAGV VLIRQRPGKG NAIFITIEDE GGIVNILLWA RHFERYRRAV MASRLMLAEG
     1021 EVQRSKEGVI HLMATRIVDR TAMLDALGSD RGFDPDLCRA DEVKHPQMPR DRAPGARHGH
     1081 PRNVRILPKS RDFH
//