LOCUS AMU94687.1 1021 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-1713 PROTEIN_ID AMU94687.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_08745" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_008995599.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MMMASLLGSS SAACVLLPAS SLLFVAPAYA QSQPAADTPS PQTEQLVGVG EAAETGEEIV 61 VTGSLFRRAN TETPSPVTVL SSTTLEQRGF NTVAEALQRV TAGNAGTMTQ GWNSGNNFAA 121 GANAVALRGL TVQSTLSVFD GLRMAPYPLA DDGQRNFVDL NTIPNAVIER IEVLRDGASS 181 TYGADAVAGV INVITKKQIE GLHANGSAGV SQRGDASEVR FDATYGYGSL ADQGFNVYVS 241 GEYLKQDALW ARDRGYPYNT SDWSRICNAA GSCLPNLNPN GVSPDGYFNG FSAVPGVAAV 301 RPVTTDGASI GSGRFAYLNP AAGCGRWDTI QVTPAQVDEA VTAPADGRVC TYNPTGQYSM 361 LQPDIERYGF TARFTANLGE DHQLYAQGNF YQTNTFSSSA PRSWTDRPTV PRSGAVVYNV 421 IAPVYVCPTG VGTLNGVGTG CNAANGVLNP YNPYAGAGQT AQIQFMPDRP TTDETSGRSL 481 RGAIGLSGSF GDSWRYSAEF TASNVQLTRV QNGYAIPQRI MDVVARGTFN FANPEANSQA 541 VWDYVMPTNI TRSESNLWQA TANLTRSLFE LPGGTLEAAL GLAYRHESID APSANPQNDA 601 HPYDRYYVIN AVGTSGSRNV FSGFGEINAP ILDQLEVNLS GRYDSYSTGQ SNFSPKVGVK 661 VTPIPQIALR GTWSKGFRIP SFNESFGTPT TGFVSQGGGT FCATYAAFCA AHGNNAYATS 721 PFSVGLTNVG NPKLSPERSE NITLGAIFEP IPNLSFTIDL WRIKVRDQIV GVSNIGPVIA 781 AYYANNGVVN IPGFTVTPGV VDQANPSALP HIGTILASYA NANRQELQGV DLGVNARFDL 841 TDNLRLTSAF EASYLDRNHL TLVDPLTGEA QDPQKFEGTL SPCNTTSCSG SPKWRATWQN 901 TLASGNTTVS VTAYYTAGYH VSQVDFGATP GDCASAVDAG AAAYPDGSPV MCKSKAIWNV 961 DLTASQKVND KFTLYANVLN LFDTKAPFDP NAAYGIYGYN PAWAGPNIMG RYFRIGAKLD 1021 F //