LOCUS AMU94633.1 645 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 peptidase M61 protein. ACCESSION CP013342-1656 PROTEIN_ID AMU94633.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_08425" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003041935.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MKKAPFVAAA LIAAPALFVS ATAAQEANSR PQPVVQPHVI PLPADKPYPG MMLLKVDATD 61 FARGIYRVRQ TIPVPRAGKF TLLYPQWLPG KHAPRGAIAE IAGFKASAGG QPLGWTRQPT 121 DVYAFDIDVP AGTKNIDIAF DFLSPTRSSE GRVVVTPAMM NLQWEQVSMY PAGYFTRQIP 181 VQLDLTLPEG WTGAAALDGL KISGNRYSYA PTSYETLVDS PMFAGRYFRK WDLGQNVTLN 241 VVADEAKYLD ATPDQIARHA ALVSETLALF GTKHFDRYEF LLALTDELGG IGLEHHRSSE 301 NSRGTDYFTK WDDGDSDRGL LPHEFVHSWN GKYRRPDKLW TPDYRTPMQG NLLWVYEGQT 361 SFWDLVLAGR SGMQSKDTIL GEWASNAAFY SVQPGRAWRS VEDTTLDPVI AARKPRPFPS 421 ATRTEDYYNE GSLVWLEADM LIRDATNNAK SLDDFARGFF GGRDGDWGEV TYNFADVVAA 481 LNAVYPYDWD KFLRTRLQEP GQPAPVGGIE KAGYRLVWRD APNAYDRARM ARAKNFDLTH 541 SLGMTVDKDG VAGSILWDGP AFRADIINGT KILAVDGMAY NRERLEAAIR AAADGKTPVR 601 LLVERGGRYR TVEIDYHGGL RWPHLEKVGT GPDWFDRLLA PKRAL //