LOCUS       AMU94595.1              1565 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 glutamate
            dehydrogenase protein.
ACCESSION   CP013342-1618
PROTEIN_ID  AMU94595.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_08235"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003042026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPEKSTEDTA AGTSPAAQVP AKFAKAYQAA LQGSALPGES DDLDAKALAE AGEFAARASL
       61 DRAPGQPSFL LEPVAADGTD RRMRLVVVND DMPFLVDSTS QIAGAQGLAV HRILHPVVSV
      121 ERDAKNHLTA VDAGKDGARE SVIYMELERG DARARRRLLD ALEASLADVR AAVADWKAMR
      181 AAMLADSTMR ADGDGAELLR WFESGAMTQL GHEWRTRDGK RHDPLGICAA GTSEILSETA
      241 LEAAFAWFEK GRTAPLLIKS NRLSSVHRRV LLDLVVVPEM KGKTVERLSI HAGLWTSAAL
      301 STPPAKVPVL RAQLEALMAK FGFDPGGHAG KALAHALTAL PHDLLIAFDA ESLEELVLTS
      361 MSITDRPRPK LVMIRSPLGR HLFTFVWLPR DEVSTGRRLA IESLLVREAK AGVIGWTMAL
      421 EDGGAALLRY TLDLRGGGIV PDTEALNAQL EQMVRGWQPE VEGALARRGD PGRAAALAAR
      481 FAPLFPANYR NLYNPEEAAR DILRLRDLDA DRPRNVRLAK KSLDGDDRLR LKVYSAAGPL
      541 ALSDVVPALE HFGFEVLEEI PTELHVHGGG EGDAEATFIH DFSLRLPANV DETALMPHVE
      601 TIEGAIAAVL DGKAENDAFN QLVLVTQTDP QAIVWLRAWF RYMRQGGSSY GMDTVVAALR
      661 GAPALTAALV DRFRALHDPQ AKDAARAEEL AAEIRTGFAA IQSIDDDRIL RLFHAVIGAT
      721 LRTNAFAPAA AEALAFKIDS SLVPGLPKPL PWREVWVYSP RVEGIHLRAG PVARGGLRWS
      781 DRRDDFRTEI LGLMKAQRVK NAVIVPTGAK GGFYPKQLPS PAEDRDAWFA EGTECYRIFI
      841 RSLLSITDNI VGGKVVHPKG VVIRDGEDPY FVVAADKGTA TFSDVANGLA MERDFWLGDA
      901 FASGGSKGYD HKAMGITAKG AWVSVQRHFA EMGIDAQTDT IRVVGCGDMS GDVFGNGMLL
      961 SKAIKLCAAF DHRHIFLDPD PDPAKSWKER DRMFKLPRSS WDDYDKKLIS KGGGVFARSQ
     1021 KSIPLTPEVQ ALLGLSVAEI DPAGLISAIL RAPADLLWFG GIGTYVKAAG QNNAEVGDPA
     1081 NDALRVDAED LRVRAVGEGA NLGVTQAARI AFAAKGGRIN TDFIDNSAGV DCSDNEVNIK
     1141 IALNREMAEG RLSQDDRDAL LVRMTDDVAA LVLEDNRLQA LALSIAEKGG AAAVPSLVRI
     1201 METFEASGRL DRKVEGLAAN DELLRRSAEG SGLTRPELAV LLSTAKLALQ DAIEASALPD
     1261 DPALASDLAA AFPAEMQRDF AGAIADHQLR REIIATKLAN RIVNRMGIVH PLELVEEEGC
     1321 SLGEVAAAFV AVERLLDMKG LWASLDSAGI NESIRLSLFS QAASAMASQM ADLLRVSPGL
     1381 AQPGALVARL EPGVDRLTAT VDTLLSASVR RQWDALAQQL LDAGAPEALT AAVVRLFKTD
     1441 GAIGIVDLAE RRGDDEVGVT RAFTHLGDAL GLDWAQTLAA HMSPADPWER LLVNSLARDF
     1501 QQMRLSFLAG LPKGDLDAGV SKWLEANGPR VAQFRTTVDR ARTIPNPNGA MLSHIAGQAR
     1561 GLLGR
//