LOCUS       AMU94503.1               754 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 malic enzyme protein.
ACCESSION   CP013342-1526
PROTEIN_ID  AMU94503.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_07775"
                     /EC_number="1.1.1.40"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003042279.1"
                     /note="NADP-dependent; catalyzes the oxidative
                     decarboxylation of malate to form pyruvate; decarboxylates
                     oxaloacetate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MDGGSKVQFS DREALLYHSY GRPGKIEIVA SKPMATQRDL SLAYSPGVAV PVNAIAEDPA
       61 KAYDYTAKGN LVAVISNGTA ILGLGNLGAL ASKPVMEGKA VLFKRFADVD SIDLELKTED
      121 PQAFIDAVEL LEPSFGGINL EDIAAPNCFI IEAALKEKMN IPVFHDDQHG TAIITAAGLI
      181 NACHLTGRDL ADIKVVVNGA GAAAIACTAL IKAMGVRHEN VIMCDRKGTI FQGRTEGMDQ
      241 WKSAHAVPTE ARDLTEALRG ADVFLGLSAA GALKPEMVKD MAPAPIIFAM ANPDPEISPP
      301 DARAARPDAI IATGRSDYPN QVNNVLCFPF IFRGALDVRA TAINEEMKIA AAYAIADLAR
      361 QQVPEEVAAA YGGRASSFGP EYIIPSPFDP RLMEIVPAAV AKAAMETGVA QQPIDDLEAY
      421 RTQLRARLNP TTSVLTLAYE AARANPKRVV FAEGEEEVVL RAAIQFRDGG YGIPVLVGRE
      481 GLHNKLRDMG VADPESFEVH NSVNSPHVPQ MVEMLYERLQ RRGYLRRDIE RMVNRDRNIF
      541 GSLLLKLGLG DAMITGVTRT YSQTMREVRR VIDPAEGKTA FGIHVLVGQH HTIFMADTTV
      601 NERPSAEMLA DIADRTAQVA RRMGHEPRVA FLSYSTFGNP PGSWLDNIRD AVHILDGRQP
      661 AFEYEGEMSP DVALNPRVMA NYPFCRLSGP ANVLVMPGLQ SGNLSAKLLR ELGGSAVIGP
      721 MLIGMEKPVQ IATMASTASD LVTLAVLAAG GIAV
//