LOCUS AMU94361.1 689 aa PRT BCT 21-JUN-2016
DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 peptidase S9 protein.
ACCESSION CP013342-1383
PROTEIN_ID AMU94361.1
SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098
ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098
Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
Sphingomonadaceae; Sphingopyxis.
REFERENCE 1 (bases 1 to 3979087)
AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
111660), a Polyethylene Glycol Degrader
JOURNAL Genome Announc 4 (3) (2016)
PUBMED 27284143
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 3979087)
AUTHORS Yoshiyuki,O.
TITLE Direct Submission
JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Annotation was conducted using PGAP and MiGAP, and PGAP annotation
was curated by referencing to the MiGAP annotation with the aid of
annotation support tool of GenomeMatcher software.
##Genome-Assembly-Data-START##
Assembly Method :: newbler v. 2.8
Genome Coverage :: 110x
Sequencing Technology :: Illumina MiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 11/30/2015 14:33:14
Annotation Pipeline :: NCBI Prokaryotic Genome Annotation
Pipeline
Annotation Method :: Best-placed reference protein set;
GeneMarkS+
Annotation Software revision :: 3.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes :: 3,797
CDS :: 3,699
Pseudo Genes :: 49
rRNAs :: 1, 1, 1 (5S, 16S, 23S)
complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)
tRNAs :: 45
ncRNAs :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
/mol_type="genomic DNA"
/strain="203-1"
/sub_species="terrae"
/culture_collection="NBRC:15098"
/type_material="type strain of Sphingomonas terrae"
/db_xref="taxon:1219058"
/geo_loc_name="Japan: Kyoto"
/collection_date="1974"
protein /locus_tag="AOA14_07045"
/inference="EXISTENCE: similar to AA
sequence:RefSeq:WP_003046801.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MTTSPAAPVA DRRPHEVTLH GKTLSDPYFW LRDQSYPVID DADILDYVKA ENAYFDAAMK
61 PHAKLVETLF QEMKGRIKEA DSSVPQKDGD WLYWVEFDEG AEYKKWYRKP ASGAGQTQLI
121 LDEVAMAEGK EYFRLAELSI SPDGRLMAYS FDENGSERFE ARIRNLETGE QLPDVIPGTL
181 SSLVWTSGND AILYGLANEN WRTDNVRLHK LGTSVADDKL LYKEPDIGFG VGIGKTAADN
241 YIVIATGDNE TSEVYLLPAD NPEAPMQLVS ARQKGREYSV DERDGTLYIH TNDEHPNFRI
301 ATASVKDPGR WTTLIPGSDH SYITGLSIFR DYFVIEARED GLDQVDIRRY NAPLIPGRIK
361 FPEATYVAGL GDNPEYHQDK LRLDYESMVT PDTVYDYDLA TGTLETLKVQ EIPSGYDATQ
421 YVTEWVNLPS RDGKTMIPAS LVYKKGTKLD GSAPMHLYAY GSYGYRVPPG FSTTRLSLVD
481 RGMIYAIAHV RGGDDLGRGW YLAGKTTERK NTFNDFIDVA RGLIAKNYTS AGRISVEGRS
541 AGGQVMGVIY NEAPELWGAV LAGVPFVDVI NTMVDETLPL TPGEWPEWGN PVTDKAAFDY
601 MLSYSPYDNV TAKAYPPMLV SAGLNDPRVT YWEPAKWVAK LRATRLGDAT LLLRTNMGAG
661 HGGKSGRWGA LHEDAEEYAF VLTQLGVEK
//