LOCUS AMU94321.1 1147 aa PRT BCT 21-JUN-2016
DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 chromosome
segregation protein protein.
ACCESSION CP013342-1342
PROTEIN_ID AMU94321.1
SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098
ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098
Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
Sphingomonadaceae; Sphingopyxis.
REFERENCE 1 (bases 1 to 3979087)
AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
111660), a Polyethylene Glycol Degrader
JOURNAL Genome Announc 4 (3) (2016)
PUBMED 27284143
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 3979087)
AUTHORS Yoshiyuki,O.
TITLE Direct Submission
JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Annotation was conducted using PGAP and MiGAP, and PGAP annotation
was curated by referencing to the MiGAP annotation with the aid of
annotation support tool of GenomeMatcher software.
##Genome-Assembly-Data-START##
Assembly Method :: newbler v. 2.8
Genome Coverage :: 110x
Sequencing Technology :: Illumina MiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 11/30/2015 14:33:14
Annotation Pipeline :: NCBI Prokaryotic Genome Annotation
Pipeline
Annotation Method :: Best-placed reference protein set;
GeneMarkS+
Annotation Software revision :: 3.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes :: 3,797
CDS :: 3,699
Pseudo Genes :: 49
rRNAs :: 1, 1, 1 (5S, 16S, 23S)
complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)
tRNAs :: 45
ncRNAs :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
/mol_type="genomic DNA"
/strain="203-1"
/sub_species="terrae"
/culture_collection="NBRC:15098"
/type_material="type strain of Sphingomonas terrae"
/db_xref="taxon:1219058"
/geo_loc_name="Japan: Kyoto"
/collection_date="1974"
protein /locus_tag="AOA14_06840"
/inference="EXISTENCE: similar to AA
sequence:RefSeq:WP_003046654.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MQIRRLRLTG FKSFVEPTEL RIEPGLTGVV GPNGCGKSNL LEAIRWVMGE SSPKSMRGGG
61 MEDVIFAGTS QRPPRDFAEV AIHCDTEGNV VAGLSDASEG HELEIIRRIE RGAGSAYRAN
121 GRDVRAKDVA LIFADAATGA HSPALVSQGK IANVIAAKPT DRRAMLEEAA GIAGLHVRRK
181 DAEQKLRATE TNLNRLSEIV ADMEVRANAL RRQARAAEKY RKLSDDIRIA EGRLIYARWR
241 DAATAADQAR READAAEAAV KAAQTELETV SAAQVEVATR VGSARAEAQA QRDALAEATA
301 TLVRLQGEER AARQRLDDLA AQQARLAEDR AREGELARDA HAALTALDAE AKRLTQDIAA
361 HDAGKAALVE AHQAAQARLR DAEVALAQAR AKAASEAADR RIAVSARDTA EAAVRRIAGD
421 RQRVEAEIAA LGDSAALAAT QAESVRGAQQ AEAAIISAES ALHEAEADRE AIAADLGAID
481 AGLAEARAAL AALDGEAATL ERALAAARTD DDRILDRLRV TPGHEAALAA ALGDDLDAGT
541 DRAAARSWGA ADADKNDPAL PAGTQPLAAF VQAPPALVRR LAQIAVADRD TGQPLAVGQR
601 LVTLDGVMRR WDGFVTRGDG ATATERLQRQ NRLDALAAQR PQVELGVQEL QDRRHVAATQ
661 LAERTDAAAA ARKALASADE ARRTALRAAD QAQAALDRHR DAAALFDRRL AEIAAAGSDA
721 AADLTAKEAA LAALPDDSLA RAALEGEESA TDRARSDANG ARDALADHER ALAGLSERHA
781 VVGAEIKSWK ARAGEAARRV TDMDKRADAL TAEAAKLAGL PEKLAADSEA AAARQTEVRG
841 KVGAAEAQER EAEAALREAE AALTTIRERV AAARETRAGA VARSENAELR RIEMGRLSGE
901 RFECPPPLLP QKVGFEGDGV DDANAESAAH DRLIGERERL GPVNLVAADE LAELDVERER
961 SAAEIEELQQ AVNRLRGSIG NLNREGRVRL LAAFETVNEH FQRLFTTLFN GGQAHLELVD
1021 SDDPLEAGLE IMAQPPGKRL GTLTLLSGGE QALTAVALIF GLFLTNPAPI CVLDEVDAPL
1081 DDANIERFCD LLDRMTRETK TRYLIVTHNA VTMARMHRLF GVTMVEKGVS RLVSVDLGGA
1141 EELLAAE
//