LOCUS       AMU94309.1              1030 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 pyrroline-
            5-carboxylate dehydrogenase protein.
ACCESSION   CP013342-1330
PROTEIN_ID  AMU94309.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_06775"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003046576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTQPTDRAAI RALARRSEAD LVADLRTQLA RSPATLEAVT RRGLALIRKA KAEGERETLV
       61 AQLMNRYRLS TEEGVVLMCL AEALLRVPDS ATANALIRDK IAGRHWREGE DEDSPLVVAL
      121 SARGLSLGSA TLMLGAMGSK ANPLTLLKSM IRRSGEPVIR QAALAAMKLL GQQFVMGETI
      181 DAAVRRADKD KGELASFDML GEAARTAEDA RRYYDSYAAA IARIGRDAKP GDPFANHGIS
      241 IKLSALHPRY EYLQAERVRE ELIPDVIALA RAARGVNIPL MIDAEESDRL EPHLDVYGAL
      301 IDAGLADGWT GLGIVIQAYQ KRASEAIRWV AAKARARGVM LSMRLVKGAY WDTEIKRAQT
      361 MGLGDFPVFT AKNHTDLNYM ACAQILREHQ DCIFPAFATH NAMTLAFIAE LFDGADYELQ
      421 RLHGMGEGAH DAIVALSPPP RPVRVYAPVG THRDLLAYLV RRLLENGANS SFVHQFSDPD
      481 VTAEELAVDP RSIASVPSKI PTGLQLFDPV RRNSRGYDLG EPGVPEALAA AIAGARDSGR
      541 IAAPIVGGTA AAGTAEAVRN PATGAVVGHV IEAHADMVNA AIAAARAAQG DWSLAGGAFR
      601 AERLERAADL LEERDALFLG LAIDEAGKTL VDAVAEVREA VDFLRYYAAQ ARADFSYPIA
      661 LPGPTGERNE LILEGKGVFV AISPWNFPLA IFLGQVSAAL AAGNAVLAKP AEQTPLIAHA
      721 AIELLLEAGV PADVLAFLPG RGETVGAALT GHDDIIGVAF TGSTEVARAI NRSLAGRDGP
      781 IATLIAETGG ANAMIVDSTA LPEQVARDAV ASAFQSAGQR CSALRLLCVQ EDVADTMIDM
      841 VAGAMAELNI GDPAILSTDV GPIIDAEAQA NIAAYVADAR AAGRVIAEAA RTDWPAGGTF
      901 VPPTMIRLDH VTDLRREIFG PVLHFATWKG GELDALIDAI NASGYGLTLG VHTRIDGVAA
      961 HVAARAAVGN VYVNRNQIGA IVGSQPFGGR GLSGTGPKAG GPHYLHRFAE EKSISTDITA
     1021 AGGNAALMAG
//