LOCUS AMU94303.1 652 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-1324 PROTEIN_ID AMU94303.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_06745" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003046564.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSALGSSLLP IIATLAAQGA PAAGQALPPP PPPPEPPAPH GAAPDAAPAA IPAPDGEALI 61 PPPPPVDWKD VLKDDLVTQI IEGRRRPGYT PDLPDQMRQD NVGALRPPPP QAFPGIEDQL 121 PVPDRWRLIE SLGVVKERWF DPYHQNTLKG DRPIDRSKVP WLPIRGDDWF FVASAVSDTV 181 FEPRTFPIPV GVQTTERPGS LDVFGKNRSF VLSQTLIAGA ALIKGSTAFK PPDVEYRVTL 241 AYNFNYVDVP ERRVLDVRPS QPSHRYDNFL GVQELFVDKH LGNDSDRYDF HSIRIGIQPF 301 QSDFRGFLFN DSQLGIRLFG NRDNNRFQYN VAAFWRLEKD TNSGLNDITQ SPRDDFIFTA 361 NLYRQDFPFV GLTSQVSVTY NRNREKNDIQ IDHNGFPVRP ALLGDLRGRE YDVTYLGYSA 421 DGRIGRINLT ASFYAALGED RNSFFTSKPA KIRAGFGAAE LSYDHDWMRF RLSGLYATGD 481 SDPYNNVEGG FDAIFENPIF GGADTSYWIR QTIPFAGGGR VISINGRNGI LNSLRSSKEE 541 GQSNFNNPGT VFVGAGADFD LSPETRVSVN ANHLWFDNTA GLQVLRSEGS IPKDIGWDLS 601 VAGIWRPKAT QNIVGRLSAA VLLPGDGFKD LFENRERDRA YVSVLANLIV SF //