LOCUS AMU94277.1 846 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 ATPase protein. ACCESSION CP013342-1298 PROTEIN_ID AMU94277.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_06610" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003046486.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSDQLRLDIP LLLPEVADTA DRCVARLTSE LEGREGVDKV HVVRSSDGSP PQLCIHYRPD 61 ILPLERVRQL ARSAGAELTG QYQHLFWDDL EGVGHARRAR TIGLKLREMP GVIEAEVGAA 121 GTLRAEFQRS ETSIEMIRKT LSDMGVTQKS TAVAAAAPAQ AAHQHGDDGH DHGPDHAHGP 181 DHKHGHTGED SHDHGHDHGG IFGERTELIF ALLCGLVLGI GFAIEKLAAA PEWVPLAFYI 241 AAYGFGGWFT VREAIENLKL KRFEIDTLML VAAAGAAALG AWAEGALLLF LFSLGHALEH 301 YAMGRAKRAI EALAELAPQT ATVKDADGTA REVPVEQLAI GDTVIVKPNE RLAADGFVVV 361 GRTAIDQAPV TGESVPVDKE PVADRAQAAA KPDALDAKYR VFAGTINGYG AIEIAVTRLA 421 ADTTLAKVVK MVSEAETQKS PTQRFTDKFE RIFVPSVLAL VFVLLFAWVV VDEPFRDSFY 481 RAMAVLVAAS PCALAIATPS AVLSGVARAA RGGVLVKGGG PLENLGSLTA LAFDKTGTLT 541 EGKPRITDVL PASGVPKEEL LRIAVAVERL SDHPLAAAIA RDGEAMLTST RVPVADDLNS 601 LTGRGVTAKV EGETVLIGKA EMFGADGIAP IGGEVAAAIA GLREQGRTTM VVRMGDRDLG 661 AIGLMDTPRE AARTAIAKLR ELGIGRMIMI SGDHQKVAES IAAEVGIDEA WGDLMPDQKV 721 DAIRDLKAQQ PVAMVGDGVN DAPAMASATV GIAMGAAGSD VALETADVAL MADDLAHLPF 781 AIGLSRQTRR IIRQNLVVSL GVVVVLVPAT IFGLGIGAAV AAHEGSTLVV VANALRLLAY 841 RDRSMG //