LOCUS       AMU94239.1               823 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-1260
PROTEIN_ID  AMU94239.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_06420"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003046379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MRKLLRTSGS IIAVLAGMSA AAAFAQDNAK EAPGPGASQG EIVVTGTRRN DLKAADSAQP
       61 IDIITGAELL EKGTADMNDL LRTEVPSLNV QRLVSNDGAV FTRPFSLRGL PPDQTLVLVN
      121 GKRRHRGATV QFTNVPYIRG SQGPDLSAIP SIAIGQLEVL RDGASALYGS DAIAGVLNFG
      181 LRRDREGGLL IARYGQFYKG DGEDFLVQGN VGLPFTDAGF VNISGEYVNA STTSRGIQRP
      241 DAQALIDAGV QDVPVPAQRW GNPESEAARI FVNAGIELSD EMEFYTFGNY SWSRGTTAFF
      301 YRNPDASFIS TSIPLTNTPG GQRFSFRQLF PGGFTPDFGA TVTDAALAAG LKGEFSSGLT
      361 YDLSASYGQN HASYRIENTV NPSLGLASPT SFKPGQLEQR ELAFNLDLTY PIAIGTSDPL
      421 TLAGGLEYRR ETYEITAGDI ASWQVGPFAS VIDPDTGNRV GLPVGSNGFP GFSPIQAGEF
      481 ARSNWAAYTS LEGNLTDALQ FGLAGRYENY SDFGSKFTWK INGRYDFSDV FAVRGSVNTG
      541 FRAPTPGQSN ASQVQTNIDS ITGAPLTAGI IAPNNPVAQF FGATPLRPEN SFNVAGGIVV
      601 KPSNRITFTL DYFNIKVEDR IAVSGNFNLT PAQRAQLAAL GIPGGDSFQQ VSFFTNSFDS
      661 RTQGVDAVLT VGFDLGDGKA TLGLNGNYTK TDVIKASPVI TADRERLLEL EGFVPKWKGN
      721 ASFTYAGERF GFVARANYYG KWTDYGAAPA ADQTGGAELL VDLELSYKVS DMLKLAVGGE
      781 NIFDNYPDVE ARQSQINNGI RYLRFAPTGF NGGFWYVRAT ASF
//