LOCUS       AMU94233.1               901 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-1254
PROTEIN_ID  AMU94233.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_06390"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_011542693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MMTRTILLAS AAAVATFATP ALAQSDAATQ SPAAEDAPNG SDIVVTGSRI RRQDLAGVGP
       61 ATVVSAEQIE NTGVVNIETV LQRLPANAGF AGNQTSAYWA NNGYGTAQVN LRGLGIKRTL
      121 VLLNGRRLVA GGTGANSSPD LNMIPVAALA RTDVLKDGAS AIYGADAMAG VVNLVTRTDY
      181 EGLGLSVRQG ITEKGDGSDF TADLLWGVRN DRGGFMAAVT YQKTSAVNMA TRAPCSLAET
      241 TPGMLSCVNS ASTIGGRAVL PNGQQINFNQ VLGGNGNFFE PYSAAKHNFN SNPFLNAVSP
      301 VERVSTAFFA DYDITDNIEA FGEFLYTFRK SNQIATPGTL RNLSIAASNP TNPTGQNIVL
      361 IQRRLAEPGP RQFFQETDTW QGTFGLRGKL SNDWGWEIAG AFGRNTAVDG STNIANLERV
      421 ANSLDTTKCS LAAGATIPCA DYLGFGDLTP EVLDYILFTS RDRGGNELAT VTADINGDLF
      481 KLPAGPVSFA AGVVYRKEKG WRDPDPLTVL GIANTNQQDP ISGTSTAKEA YLELSVPVLA
      541 DTPFFQSLTL DGAVRYSNYD LFGSDWNYKG SVDWVINDSF RLRGTYGTGF RIPNVPELFG
      601 GVSEGNLTTT DPCSRYSTSG NATLIANCQA SGVPANYVQL GTTILTTVGG NENLKPESST
      661 TWTVGTVISP KGLVPGLSLT ADWFDIKIKD AIRAIPGSTK LSICYASQNL SHPFCEDFTR
      721 SPLTGEVTFL SAQPINTGRE EMNGLDLGLV YNNDIGSVNV SLDVNVTYLN KYVVLPFPGG
      781 APIDFDGFIG GGNGGYPKWR GYGVLTAEKD GVSATWSTQW IGKATDFNAA PGDIGYSTPN
      841 VFYHNLQVAF EIDEKTRFQV GVDNLFDRKA PYIQSFTDAN TDTMTYDLLG RRFYVGFRTA
      901 F
//