LOCUS       AMU94116.1               890 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 aconitate
            hydratase protein.
ACCESSION   CP013342-1136
PROTEIN_ID  AMU94116.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_05800"
                     /EC_number="4.2.1.3"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003043329.1"
                     /note="Catalyzes the conversion of citrate to isocitrate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTTTGHDTLG TRSTLNVGGK SYAYYSLEKA AAKLGDVSRL PFSMKVLLEN LLRFEDGGFT
       61 VSTDDVQALV DWQKDPHSNR EIQYRPARVL LQDFTGVPCV VDLAAMRDAI AKLGGDTTKI
      121 NPLVPVHLVI DHSVMVDEFG TPKAFEQNVE IEYYRNGERY DFLKWGSKSL SNFKAVPPGT
      181 GICHQVNLEH IAQAVWSSED ADGTTVAYPD TCVGTDSHTT MINGLGVLGW GVGGIEAEAA
      241 MLGQPVSMLI PEVVGFKFTG KLKEGVTATD LVLTATQMLR AKGVVGRFVE YFGPGLASLS
      301 LADRATLANM APEYGATCGF FGIDDKTIDY MRLTGRSEEN IALVEAYAKA QGLWIVDGAA
      361 DPVFTDTLEL DLSTVVPSLA GPKRPQDRVS LPDVDDVFNA DMAKVYNKAQ TRVPVEGKDF
      421 DIGDGDVTIA AITSCTNTSN PGVLVAAGLV AKKADELGLK PKPWVKTSLA PGSQVVTDYL
      481 EKAGLQKHLD NIGFNLVGYG CTTCIGNSGP LAEPISKAIN ENGLVAAAVI SGNRNFEGRV
      541 SPDVRANFLA SPPLVVAYAL KGTVIEDFTT TPIGTGKDGQ DVFLKDIWPT NQEVADMVAG
      601 AVDRDMFEAR YAHVYKGDAH WQKIEVEGSD TYQWRAGSTY VANPPYFEGM SMTPAPVSDI
      661 VGAKPLAILG DSITTDHISP AGSIKADSPA GKWLMEHQVS KADFNSYGAR RGHHEVMMRG
      721 TFANIRIKNE MVPGIEGGMS RYGQEVMPIY DAAMRHKADG TPLVVIAGKE YGTGSSRDWA
      781 AKGTNLLGVR AVIVESFERI HRSNLVGMGV LPLQFLEGQT RETLGLTGDD SFTITGIADI
      841 KPRQTVTVEV TRPDGSTFSF DTLCRIDTAN EVEYYMNGGI LHYVLRKLAA
//