LOCUS AMU94104.1 549 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 peptidase M20 protein. ACCESSION CP013342-1124 PROTEIN_ID AMU94104.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_05735" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003043170.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MFLRPLAALL AAAFAVPALA QDISTANLTE TVRTLASDQF QGRAPGTVGE ERTVGYLIGR 61 LQALGLEPAG PNGEWTQPVP LLHTRLGTPT ALAFDRQGSA TPLTLGTDIY VSSQQDKDRA 121 AIADAPMVFV GYGVHAPERG WDDFKGVDLK GKVAVFLVND PDFVATKGED SFGKFGGRTM 181 TYYGRWTYKF EEAARRGAIA ALIVHDTDGA GYGWNVVKSP GGENYSLVVP PEKATSLALQ 241 GWISGEASTR LFASAGQDLA KLRIAARRKD FRPVDLGTGF RASIPVTHEV VRSQNVLAKI 301 SGTDRADEVV MFGAHWDAYG EGKPDEKGRI YRAGANDDAL GVAALIEIAR GFKAAPPTDR 361 TLLFAFWTAE ERGLLGSEAY AQAPVYPVEK TVANLGIDIL QTAGKSKDVI LVGKGQGTLE 421 DDLARVAAMQ GRTVSPESLP ERGLFFRADH FSMAKRGVPV LLLMGIAGVS DLVEGGKEAG 481 QKWVDDYTGR CYHQACDAWD ESWNLAGAAQ DIALFYTIGD ELARSGKWPG WKSGSEFKAL 541 RDQTAATRK //