LOCUS       AMU94075.1               938 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 helicase protein.
ACCESSION   CP013342-1094
PROTEIN_ID  AMU94075.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_05585"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003043055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPSHSSHPVK AVLGPTNTGK THLAVERLTA HASGMIGFPL RLLAREVYDR VVAIKGSAQV
       61 ALVTGEERIW PAEARYVLGT MEALPVDRDV AFVGIDEAQL GADPERGHVF TDRVLRARGR
      121 EETMILGSAS IKGLVRDLVP EIEVISRPRF STLSYAGAAK LSRLPKRSAI VAFSAEEVYA
      181 IAEMLRRFSG GAAVVMGALS PKTRNAQVAM FEAGEVDYLV ATDAIGMGLN LDVQHVAFAS
      241 LQKFDGRRVR RLTISEMAQI AGRAGRHQQD GSFGTVGQPQ GGFTPEEIAA IEGHHFPPLT
      301 SLFWRNPAPR FDTLDTLIAD LARPPEHKAL RPAPEAVDIA VLKHLASDME VRARAGEAAA
      361 VQRLWDVCGL PDFEQLGPEH HSRTVLKLWQ WRTSGNGMID PDWFARRLAR LDQVDGDIDQ
      421 LASRIAAVRT LCFIAQRGDW IEGGAGWTER TQDLESRLSD ALHAALAQRF VDRRLALLIR
      481 DAGQRHAALP VAVGADGTVA VDGEAIGTLK GFQFKVDPGA RASDHRLLLA AAEKHLRAEL
      541 ARRAALLASG EDQAIELVSE AGAPPRLAWH GQTIATLARG PTLVQPAIQI DPSLRRLEPQ
      601 QVQAIAERLQ IFVAEQLARH AAPLAAMGEA AGDLFTPPHV RALLAALVDG GGMAPRAQVE
      661 AQLGAMSADE RPYLRRLGLT VGSLDLFHHL LLKPEAVRWR AALLAAQQGS APIPALPPQG
      721 AVLQKTGNHG GLRIAGFRRC ASGWLRIDMA EKLARQAHAA RLKASHPPTE PVAGAAEHHA
      781 DHSDGADEGQ GVSAAPPPGF IIDPALATSL GLDEETRRAL LQAFGFRSVG DPALQRWRWS
      841 GLKAADKRKR RKHKVGDNRP EAKAAPSTDG HPARHRAKPG KTGKPTTAKG QRPQGQQQGK
      901 AGVRPPRTDR PERPVRRGPS PNSPFAGLAA LMAEARKD
//