LOCUS       AMU94053.1               670 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 ligand-gated
            channel protein protein.
ACCESSION   CP013342-1072
PROTEIN_ID  AMU94053.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_05475"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003042996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MKSHVTRAAP LLALAISLAP AAHAADAEDQ STIIVTAPQL TDAAEARAAR TPGGTDVVSY
       61 EDYADKSIVS LRDTLAFSPG VYLQPRYGQE VRLSIRGSGL SRGFHMRGIT LLQDGVPINL
      121 ADDNGDFQEL EPIFFDHLEV YRGANALRFG SGTLGGAING VTPTGRTAEG VYLRADAGSF
      181 SMLRGLVSAG VASEAVDAWG AVSADTSDGD RDHAKRRSFR FHSNVGLRLS DTVSTRFYAS
      241 FNNINQQLPG ALTYDQALTT PKMANAGSAA GDQQRDIDSL RLQNRTTFDF GSATLEVGGF
      301 INAKSLFHPI FQVIDQKSTD VGSFARLDYA AGPVELTLGG EIRHGSTKAK QFVNISGSRG
      361 ALTFDADQKA QTASLYGEVR VRPVPQLSLI AGGVYADGWR KRHVNFSASP ASDGRVDLDA
      421 FSPKFGLLFE PSSRIQIFAN YSRSAEFPGF GEVFQTIGTP PTSAVVSAIR PQRAWTAEIG
      481 TRGSVGIAHW DLALYRSTLT GEMLQFSTNS SIPAATFNAD RTLHQGIEAA LELNFAPWVR
      541 LRQIYTYSDF RFRGDSQFGN NRLPVVPKHV YRAELRLGSE ALHVAPNVEW VPDGPFADYR
      601 NLVRTPGYAL IGITGGAQIT DGIDAFVDVR NITGKKAIGD ISATITATPG SAIYYPVERR
      661 AISAGLRARF
//