LOCUS       AMU94020.1               600 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 fumarate
            reductase protein.
ACCESSION   CP013342-1038
PROTEIN_ID  AMU94020.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_05305"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_011543299.1"
                     /note="part of four member fumarate reductase enzyme
                     complex FrdABCD which catalyzes the reduction of fumarate
                     to succinate during anaerobic respiration; FrdAB are the
                     catalytic subcomplex consisting of a flavoprotein subunit
                     and an iron-sulfur subunit, respectively; FrdCD are the
                     membrane components which interact with quinone and are
                     involved in electron transfer; the catalytic subunits are
                     similar to succinate dehydrogenase SdhAB; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTEAYKIIDH TYDTVVVGAG GSGLRATMGS AEAGLRTACI TKVFPTRSHT VAAQGGIAAS
       61 LGNNSPDHWQ WHMYDTVKGS DWLGDQDAIE YMVREAPAAV YELEHAGVPF SRNANGTIYQ
      121 RPFGGHMQNM GEGPPVQRTC AAADRTGHAM LHALYQQSLK YDADFFIEYF ALDLIMEDGV
      181 CRGVIALCME DGSIHRFRSQ AVVLATGGYG RCYFTATSAH TCTGDGGGMV LRAGLPLQDM
      241 EFVQFHPTGI YGAGVLITEG ARGEGGYLTN SEGERFMERY APSAKDLASR DVVSRSMALE
      301 IREGRGVGPH KDHIFLHLDH IDPAVLAERL PGITESGKIF AGVDLTRQPL PVVPTVHYNM
      361 GGIPCNYHGE VVTLKDGNPD AVVPGLFAVG EAACVSVHGA NRLGSNSLID LVVFGRATGH
      421 RLKEIVAPGA AQPALPKDSA DLALGRLDHF RNASGDSPTA EIRTEMQRAM SQHAAVFRTD
      481 ELMAEGKDKL AKTYERMNDV HVADRSLIWN TDLVETLELD NLIAQATVTM HSAFNRKESR
      541 GAHAHEDFPN RDDANWMKHT ISWFDGWGGK DGKVTLDYRP VHEYTLTDDA EYIKPKARVY
//