LOCUS AMU93949.1 474 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 amidase protein. ACCESSION CP013342-967 PROTEIN_ID AMU93949.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_04950" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003042761.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MGFAEYESYD ALGLADLVAK GAVSPLELVD SAIERIEALN PRLNAVIFTD YDGARARAKA 61 PLPDGPFRGV PFLLKDILGD LAGWPTRNGS RISPPVPMPF TATLVQRFLA GGLIPIGKTN 121 VPEFGVVATT ESKLYGPACN PWNPAHSTGG SSGGSGAAVA SGMVPVAHAN DGGGSIRIPA 181 SCNGLVGLKP TRGRNPLGPL LGDVMGGLAA EHIVSRSVRD TAAMLDVTAG AEPGDPYAAP 241 PAPPSWRRAA EAPCPKLRIA FARAAPGGRA LDPQAVAAAE HAAKLCEGLG HHVEEASPPV 301 DNDAMVPAFM AIWSSGAAMQ IDGIAMMTGQ TPGPDNLEGL TRGLYAMGKA ISAPQLWGAI 361 FQLQQMARAV AAWHADHDVW LTPTLGAPPP RNGSFPLDSE DVAAGFGAMT DYVPFTAIQN 421 ATGQPAINVP LWWTPEGLPM GTQFVGRFGE EALLLQLAAQ LEEAQPWFGR RPAL //