LOCUS       AMU93945.1               406 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 sodium:proton
            antiporter protein.
ACCESSION   CP013342-963
PROTEIN_ID  AMU93945.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /gene="nhaA"
                     /locus_tag="AOA14_04930"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003042754.1"
                     /note="exports sodium by using the electrochemical proton
                     gradient to allow protons into the cell; functions in
                     adaptation to high salinity and alkaline pH; activity
                     increases at higher pH; downregulated at acidic pH;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MLLIFAAALA MIIANSALGA DYHHAIHAVT GPTLTDKLGP MTVHLWVNDG LMAIFFLLVG
       61 LEIKREFVDG RLASWDRRRL PMIAAAAGMA VPAVIYILLA GGTAGLAQGW AIPAATDIAF
      121 AIGVLALLGK RAPTSLKLFL VTVAIVDDMG AVAIIALFYT AEINMLALGA AALLLGVMFA
      181 VNRAGVKHLA VYLLLFALLW YAMLLSGIHA TIAGVLAAMA IPFERTPGAP DSETSPLHRL
      241 EHGLHPWVAF AIVPLFGFAN AGVDVRGLGV DQIFAPLPLG IAAGLFFGKQ VGIFGSVWLA
      301 VKLGIAGKLR GATWLQIYGV SVLCGIGFTM SLFIGGLAFP GNALLIEEAK IGILMGSLVA
      361 ALTGFAVLRF APLHPDHSGI ETSSDAEIAR DGDVSDTSEV RPATAG
//