LOCUS       AMU93934.1               846 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 translation
            initiation factor IF-2 protein.
ACCESSION   CP013342-952
PROTEIN_ID  AMU93934.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_04875"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003042719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSDEQDKPTL TRKPLGLKRT VEAGQVQQQF SHGRRNTVVV EVKRRRVLGR PGEAAPAPEA
       61 EAVEAAPAPA PKPAAPAPAP KPAAPKADSL MSRQERQTQL LREAEEARLA ALEEARRREE
      121 AERARALEEE RARAAEAREE KSKASEEAPA PAAAEPAAEA PAAPAAEAKP AEAAPRAATT
      181 SSAAPAPRRF TPVEAPKRPE PKRAEQKKEH RGDHRRQSGK LTVTRALNED EGARARSLAA
      241 LKRAREKEKR SHLTPSGPRE KQVREVVVPD TITVQELANR MAEKGADLVK ALFKMGMMVT
      301 VNQTIDQDTA ELLVTEFGHE IKRVSEADVD IRNDQDVDAP EQMKPRAPVV TIMGHVDHGK
      361 TSLLDALRGT SVQSGEAGGI TQHIGAYQVK TPDGSQVTFL DTPGHEAFTE MRARGANVTD
      421 IAVLVVAADD GLKPQTIESI NHAKAAGVPI IVAINKVDKE GANPQRVRER LLEHEIVVEE
      481 MGGDVQNVEV SALKKTGLDK LLDAIALQAE IMELKANPDR SAEGTVVEAK LDKGRGPVAT
      541 ILVRRGTLKV GDIFVCGAES GRVRALVNDQ GQQIKEAGPS MPVEVLGLGG VPMAGDTLTV
      601 VENEARAREV AAYRQEQALK KRTAQAPVSL EGMFSALADK ANVIEYPVVI KADVQGSVEA
      661 IVNALNKLST DEIRVRVLHS GAGAITESDV TLAAATNAPI IGFNVRPNAK AREIANREKV
      721 RFMYYDVIYH LTEEVAKEMA GELGPERVET VVGRAEVKEV FPAGKRDKAA GLLVLEGIIR
      781 KGLHARLTRE DVIVSATTIA SLRRFKDDVA EVRAGLECGV VLADTNDIKP GDHLEVFEVE
      841 ERARTL
//