LOCUS       AMU93827.1               941 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-843
PROTEIN_ID  AMU93827.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_04320"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003047082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTNNKSLRRG GSALALGLAS IVFAPGVALA QDAGASSADD SSGEGEIVVT GFSASLQSAV
       61 NAKKNRDQVV ESISAEDIGK LPDASIAESI ARLPGLTSQR VSGRSNAISI RGFAPDFSTT
      121 LLNGREQTST GDNRAVEYDQ YPSEVINQVL VYKTPMASIV GQGLSGTVDL RTIRPLDYGK
      181 RVISVGGRGS WAEIGKLNAG SKKYGYRVNG VYVDQFANDT LGIALSASYV DEPYQIQEFN
      241 AWGYAGDGTA ANPVVIGGSK SYATSTQLTR LGLQGTVQWR PSPNFTSTID AFYSDFKDDQ
      301 IKRGIELPLA FGGAGVNVTD VDSSGQYVFA RSGTFTNVEG VVRNDVFERQ AKLYSFGWNN
      361 RWEGDNGWNV TADISLSKTD RNELILESNA GTGRGAGVGA TDTIGFSSDR NGTVFSPGLN
      421 YGDYDLIQLT SPLGWGGDQT GVDGTRIRGG QDGYYNNRII KDELWQYRVE VERELDGFLK
      481 SVQFGVNYTD RSKSLVPDEA FVGLVANTDG LTSVPIPEQY RLGTTNLSYL GLGPVVSYDP
      541 RDLLAAGIYQ LVANPYGDVV VKSYDVSEKL MTTYLQANID QEMGSSVLTG NVGVQAIFTD
      601 QNSNGASAAY IGQNANGSPN IQGIPQRAST DYVDVLPSLN LSLRTASDFV VRFSLAREII
      661 RPRLDDMRAS LKYGTTIGDV GNGVCPVGRQ CAVVRGDAGN PDLRPWRANA ADLTFEKYFG
      721 SKGYLAVQLF YKDLKSYIYN QDVAFDFTGY PIQDPGLDVN GNPIIVNYLG TANVPINGKG
      781 GKLYGVELAG TLPLGELVSA LDGFGVTGGA SYTKTKIQPT PGAPAQDIPG YSKWVANGTA
      841 YFEKWGFNAR VSARYRSSFI GELSGFGGNR VRRRARAETI VDAQIGYDFQ PGSALEGLSL
      901 FIQGQNLTNE PFVTDDPRDS RAVIDYQVYG SRYLAGASFK F
//