LOCUS AMU93803.1 611 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 gamma-glutamyltransfera se protein. ACCESSION CP013342-819 PROTEIN_ID AMU93803.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_04195" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003038682.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MRRRTLLAAA PAVALLPTAG LAQSAKPAPK GDPALPPAWD KDSERFLRPD VHAGDRPVGA 61 SFASRTAAYG LSGAVGTAHP LATQAGIDML KRGGSAVDAA IATNACLGLL EPTANGIGGD 121 AYAMIWDPKA KKVVGLAGSG KSPRALDLAT VRSRATGGAI PAYGAIAVSV PGTVDAWWTM 181 HQRYGKLPWK ELFEPVIAHA EAGAPVPDMI AYYIRRSLAG FRQPGRGIEE VDNALRTYGM 241 ADGKGPQAGQ VFRNPDLART FRLIAEGGRD VFYDGEIART IDAYFRRIGG WLRREDLAAH 301 RSEWIEPHRT SYRGTDVYAL GANTQGIATL QMLNILENFD LKGAGFQSAL SIHLQAEAKR 361 LAYEDRARYY ADPHFSNVPV EWLISKDYAA ERARLIRPDR ILTPVHPGQA PSHGDTTYFS 421 VADKDGMMVS MIQSNFRGMG SGLVADGLGF MFQDRGQLFS LQDGHPNIYA PGKRPFQTII 481 PGFAAHGDTP WMSFGVMGGD MQPQGQTQIM VNRIDYGLEI QAAGDSPRWH HEGSSQSMGE 541 DASGLGPKGL LRLESGVPAA TRAQLAALGW TIGNPDGGFG RYQCVEHRMD GDTRVYAAAS 601 EMRADGCALA Y //