LOCUS       AMU93588.1               769 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 patatin protein.
ACCESSION   CP013342-600
PROTEIN_ID  AMU93588.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_03075"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003040679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MREKELRFAL ICYGGISLAV YMHGITKEVW RLAAASRTFH DEAEPAAVDA YGELLVALAA
       61 RSGIKLRVLA DIIAGASAGG INGIFLARAM ATGQSLDPLT ELWLDDADVD RLIDPDARPL
      121 SAATKFWAVP IAGWAMKRRG NVIDRTVGEG AQDEVRAKLS RFVRARWFEP PFGGQIFSGL
      181 LLDAFDAMAS GPQGRPLLPA GQPVDLFVSV TDYAGHSMPL ALNSPPRVTE QEHRLIMHFR
      241 QDGRAGKRLD DVPGLAAAAR ATASFPGAFP PFTLRELDSV LEKRGIAWPA RADFVRVQLP
      301 TGSEADPSDR VLIDGSVLAN APFRPAIAAL KQRPARREID RRFVYIDPKP DYRSISFGKP
      361 GEAGEGEARR PPGFFSTILG ALSEIPREQP IRDSVEAIEN MSRRIRRMQR VVDAMKVEVE
      421 EQVAALFGTT FFLNTPTPAR LDRWRAKAQA EAAARAGFAY APYGHLKLSA VVEELVALID
      481 RLAPPEGDIH QRNRRDAVWD EIRSRGLDRI SGKRGSGAST DAIAFFRTHD LGFRIRRLRF
      541 LARELDAAVE AKRDAPDPAC ETMRGAIYTA LGLYLEREGD QWLERLDVPA DASAAQWIDA
      601 IAERRDLVSV DADADILIAA ALGSLPKDDR RTMLLAYLGY PFYDIATLPL LQGEGFDEFD
      661 PIKIDRISPS DATAIRTGGA ASMLKGIEFN SFGAFFSRAY RENDYLWGRL HGADRLIDIV
      721 ASSVGGEGAL RTDELAALKR RAFYAILDEE EPRLPKVAAL IAELRGQIG
//