LOCUS AMU93540.1 751 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 phosphoribosylformylgly cinamidine synthase protein. ACCESSION CP013342-552 PROTEIN_ID AMU93540.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_02835" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003040560.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTQTASAPAS VITPEIVADH GLSPEEYERV LAALGREPNL VELGIFSVMW SEHCSYKSSR 61 LHLKKLPTEA PWVICGPGEN AGVIDIGEGP DGTKLAAIFK MESHNHPSYI EPYQGAATGV 121 GGILRDVFTM GARPVANLNA LRFGRPDHPK MKHLISGVVH GIGGYGNCVG VPTVGGEVNF 181 HKAYDGNILV NAMTVGVAEQ DKIFYSAASG VGNPIVYVGS KTGRDGIHGA TMASADFGED 241 AEEKRPTVQV GDPFTEKLLI EACLELMASD AIVAIQDMGA AGLTSSSVEM ASKGGVGLHL 301 KMDDVPQRET GMTAYEMMLS ESQERMLMVL KPGKEEFAKA IFEKWELDFA VIGTVTDTGR 361 MVLEHHGEIV CDIPLAPLAD DAPLYDRPHV PTPKQPDLTD VPETADVAAD LKTLMGSPDI 421 ASRRWIYEQY DSQVGGDTVQ IGGDAALVRI HGTGRALAMS TDCTPRYCYA DPVEGGKQAV 481 AETWRNISAV GATPLAITNC LNFANPQRPE IMGQITGCLD GMGQACRALD YPIVSGNVSL 541 YNESKATGGG SAILPTPAIG GVGVIDDLSK AVGIGFKRTG DIVLAVGERA GHLGQSVWLR 601 EILGREEGPP PPVDLRAEKR TGDFIRHAIN AGWITACHDV SDGGVAVALA EMALKSGIGV 661 LVSEEQPFGI AESFFGEDQG LYLVTVCDTC LADFLDAANR ADVPVDPLGR TIKDRIVFEL 721 PESDFSVTLA ELREAHEGFF PALMGADAAL A //