LOCUS       AMU93507.1              1025 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-519
PROTEIN_ID  AMU93507.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_02670"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003040475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MITVRAMRAG LYGGLSALAI LAAAAPAAAQ DVAPDASADA DSSTQIIVTG SRIARTDADT
       61 IQPTLVTTSD QIDRRGYTNV AQALSEIAAF GVPGNSNVGA QEGPFGSGQT FVDFFSLGSQ
      121 RTLTLVNGRR FVSSNTASVF GPAGPGSQVD LNVIPETLVD RIETVAVGGA PIYGSDAIAG
      181 TVNIILKRDF DGLEIKGQAG VSQRGDAPDY RISVIWGADF ADGRGHITLS GEWNRARGLA
      241 TGDRFLTSAA GPFFTTAADP ASPFQQQLYY DQRLNVFTNS GVPLAFDSIP EFGGIFDASG
      301 NVLTFNDAGR LVPLDFGTRT GSLFESSGGN GFATKDYGNL STNNDRYLAT ALGSFDLSDT
      361 VRWFGEGWYA HSKGTNIAAQ PLYNTALAGP GTSPNGNLVL SLDNPYLIDA DRATIRDNLA
      421 AYGLLGGIPI DADGDGNPDF ATAPDSFLMA RANTDLTTGR ADTTVELYRF VTGLDGELGG
      481 GDRIYKWDVS ANYGHSKTRG RERVLVQQNF LNAVDAVDEG VFGGGAANGN IICRPGYSNA
      541 NIATLNATCA PLDLFGVGRF SQAALDYVTT IADPTATNSQ FVLSASVNGP LFQLPGGDVI
      601 ASLGYEHRHE KTAFDPGAYY YGEDVGGGFR MPFGRSIPID PVRGSFTTNE FSGELKIPVV
      661 TPGMDSFVNA FELDGAARYI DHSAAGGDWT WTAGGRLSPV ADVTIRGNFT RSVRAPAITE
      721 SFSPTSLAFA TANDPCDRRF VNSGPNPAQR RANCIAGGIA NPDAFTSNIV GFTAPISVSG
      781 NAALKNERAD SWTVGAIVRP RFVPGLTITA DWVDIRLRDA IILLGAGQTL DACYDAVAYP
      841 ATVCGQIDRD PGGQVTFVRT GYANAASMDF RGLTAEIAYR REIAADTALG LSLNYFYLDK
      901 LQTRVGTGDI DTARGEIGNP KHSFTANVTV DRGPVNLLWQ TQYYGKSVWN ADAAPNALEY
      961 SGVGSWWLFN ASLGVDVSKQ FSLRLIVDNV FDAKPPFPAP AANGTITYYS GILGRYFRAS
     1021 ATAKF
//