LOCUS       AMU93502.1               986 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 double-strand
            break repair protein AddB protein.
ACCESSION   CP013342-514
PROTEIN_ID  AMU93502.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_02645"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003040464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSKPTLYSIP IHRAFADALA AGVIARFDDG ALGLAHGLIL LPSNRARSAV QAAFVRAGGQ
       61 GLLMPRLAVI GDTDLDESVA LSLDAIDDDP LPPAIDPLHR RLLLTELIER HTPPGEPAIT
      121 GAAAFQLADG LGRVIDQLHY EEVPVSALVD LDLGAFADHW RASLSRLRLL VDEWPATLAR
      181 TGAIDRAARR NLLLDRVAAG WRAAPPARFV VAAGVTTAAP AIARLLRTVA DMTRGMVVLP
      241 GLDQVMAADE WDALGPTRPD ADDDRRPLET HPQYHLKLLL DRMGVARDEV QPWDAASPHD
      301 GPEARTPFAS LLFAPADYST QWQAAGDLSA AVAGLSGAVF ADDGQEAQGI ALLMREAIET
      361 PGRTAALLTP DRALAERVAA ALTRWGISVD DSAGQPLSRT APGALLLLLA DLAAAFDPVA
      421 LVALLGHPLV RAGGERTMWL DEVRRLDLTL REPGLLPGWD GVSARIAARA ADPKARGHAI
      481 VVQMAPWWTR VSTELAAALV PFGAGPAPPA DLLAALQRAA EWLAGDAVWA GPAGRMLAEL
      541 FDQWALARGA GPALVDPADF PAMLGQLLGQ ASVRPPYGGH PRLFIWGLLE ARLQRADLMI
      601 LGGLDEGRWP AATQPDPWLA PGIRRLLGLA APERQQGMAA HDFAGALGGG KIVVTRAQRS
      661 GGDPAVASRF WLRLAALAGE LPEPAPGGVP LTRLAAEIDL PPGGAQPAGR PAPQPPAADR
      721 PRRISVTGVD KLARDPFAFY ADRMLGLSAL DPLSAAPDPR WRGTRVHKLF EDWVRGGATR
      781 DAFEAELAAL AADPALDGIA RAFWLPRIAP ALRWAAEQVW EAERKPVAVE ARGERTDDGI
      841 TLHGKADRID RGPDGLAIID YKSGGAPSAQ AAADGLDNQL GLLGLLAREG AMEGIDAAPV
      901 VALEYWSLRP DRRADGAGRI SNSYGPRSTL KTAEAAIDHA AGTLTRLARD YLLGDAPFLP
      961 GEGRGYGDFD QLMRRDEWFG RGEDGL
//