LOCUS       AMU93501.1              1155 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 DNA helicase
            UvrD protein.
ACCESSION   CP013342-513
PROTEIN_ID  AMU93501.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_02640"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003040461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSKSAGLAIL DPRQGAAADP ESHVWLGASA GTGKTQVLSA RVLRLMLDGV SPQAILCITF
       61 TKAGAAEMAH RIHERLATWV RMSDGDLRLD LHALGLDWER PGLMTRARSL FATVIDSPGG
      121 AIRVQTIHSF CQTLLASFPL EAKLLPGFRA IEEDEAAALK RQILGDLLEH DPDREALRAV
      181 AAILSRRLGQ ESALAFLSSC AAVFGGPRAA LPPAAQDLRA AFDLPGGDPD AWLAAEIAGG
      241 AISDADIKAV ATSGAAWGTK TGEACSDKMV GWLIAEASAR AAMLDELLGC FLTGKGELRA
      301 DFAGDKGRMT DCADSAVRIV DAAGRLRATA TAMRVADDLA AGWKLGARFA EAYALAKRDA
      361 GLADFDDLIT LAGTLLRVSS FGEWVRFKLD QRTDHILVDE AQDTNMRQWG IVLSLAEEFF
      421 AGVSAKDDRL RTLFTVGDRK QAIFGFQGTD PRAFANARDM FHAMGEMGGQ PFRQVDLVSN
      481 YRSTPAVLDV VDRWLGDGGT IAMGLDGEEP PHRPFRSAQA GQVELWAPLP VGKAIDAAAA
      541 EDGGDEGDGS APASDPASMR LAKAIAGEVQ DWIANGKDGR PVAPGDIMIL VRRRRDLAAR
      601 IVARLQTLHV PVAGVDRFAL TQPLAVQDLI AAMRFAVQPL DDLNLAALLV SPLLGWTQDE
      661 LYARTAKRGR AAIWEHLRSH EETMPPATMA ALRALLGMAD FTTPFRFLET ILSGPIDGRR
      721 KLYARLGREA RDPIDELLSQ ALAFEARETV SLLGFLTRIA GSSADIKRQT EARSDVVRVM
      781 TVHGSKGLQA PIVILADATD DAAIGHRPFT VDVAAWEKLP VFAMPADERQ GALAQAYQDA
      841 ADAAAQEHWR LFYVAMTRAE EMLIVAGVTK KPDLSVPETS WHSAAAMALE GLGCDWEDAG
      901 PLWGRRRVHR INDGKWARRD AAVRAAPPPL ALPAWTHAPA PEEARPPRPL APSALGEDDV
      961 AVPPQGAARV AAVTRGLLLH ALFERLPPVA TDRRRAAALR WLAVQAPTLD DAARMAMADE
     1021 VLAILDDPAH AALFGPDSLA EVPLSAVVDG MVVAGIVDRL RVTDDAVTVI DYKTGRRIPG
     1081 SAADVAPAYL RQMAAYRDAL AVIFPGRRVE TALLYTAEPR LIALDDAVLA PHKPGLLAAK
     1141 ANLPPPPLEP GAPTS
//