LOCUS       AMU93490.1               778 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 ATP-dependent
            Clp protease ATP-binding subunit ClpA protein.
ACCESSION   CP013342-502
PROTEIN_ID  AMU93490.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /gene="clpA"
                     /locus_tag="AOA14_02585"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003040431.1"
                     /note="ATPase and specificity subunit of the ClpA-ClpP ATP
                     dependent serine protease; directs protease to specific
                     substrates; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPSFSESLEK TLHNALKAAS ERHHEYATLE HLLYALIDDE HAAEVMRACG VALGELQSAV
       61 VHYLDTELDS LKVEGHSDPS PTSGFQRVVQ RAILHVQSSG KDEVTGANVL VALFSERESY
      121 AVYFLQQQDL TRLDAVSYLS HGVGKGGKPS PTAEPEEKEE AKDKSEGKNK KETALDQFTV
      181 NLNEKAKGGK VDPLIGRSAE VDRTIQILCR RSKNNPLYVG DPGVGKTAIA EGLARKIIEG
      241 DVPEVLKEAV IYSLDMGALL AGTRYRGDFE ERLKQVVSEL EGMPHAILFI DEIHTVIGAG
      301 ATSGGAMDAS NLLKPALSGG VIRCIGSTTY KEFRNHFEKD RALLRRFQKI DVIEPSIEDT
      361 KKILAGLRDA FESHHNVKYT ADAINAAVEL SSRYINDRKL PDKAIDVIDE VGAMQMLVPP
      421 SKRRKTITAK EIEAVIATMA RIPPKSVSSD DKKVLETLET DLKRVVFGQN TAIEVLSSAI
      481 KLSRAGLRDP EKPIGNYLFS GPTGVGKTEV AKQLAHLLGI PLQRFDMSEY MERHSVSRLI
      541 GAPPGYVGYD QGGLLTDAID QNPHCVLLLD EIEKAHPDLF NILLQVMDNG RLTDHHGKTV
      601 DFRNVILIMT TNAGASDMTR ESIGFGTQTR EDAQEEAVKR MFTPEFRNRL DAIVPFGYLP
      661 PEVVARVVDK FILQLELQLA DRNVHIQLDD KAREWLTAKG YDKLYGARPM GRLIQEKIKQ
      721 PLAEELLFGK LVHGGEVKVK LKTGEDAKVG NPLSFEITPA APKASKGKGK AKAEKAAE
//