LOCUS       AMU93345.1               515 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 glycine dehydrogenase
            protein.
ACCESSION   CP013342-357
PROTEIN_ID  AMU93345.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_01860"
                     /EC_number="1.4.4.2"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003039987.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     forms a heterodimer with subunit 1 to form the P protein;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTALNPAGWR PEMHGAGGAA DTATFTGNRA LLLEEPLIFE IGSTATTGVD FDEAAPAADL
       61 GALMRRDPIG LPGLSESETV RHYTRLSRQN YAIDLGLFPL GSCTMKHNPR LNEKVARMPG
      121 FADVHPLQPQ ETVQGALAVI NELAVWLIEL TGMYGVAMSP KAGAHGELCG ILCIKAALEA
      181 RGEDRRVLLV PESAHGTNPA TAAFSGFTVE DIPATAEGRV DLAALKARLG PDVAGVMITN
      241 PNTCGLFERD MKAISDAVHA VGGYVYCDGA NFNAIVGKVR PGDLGIDAMH INLHKTFSTP
      301 HGGGGPGSGP VVLSKALAPY GPIPYSARYA DGSFKLVEEE SAGAEHPDTF GRMTAFHGQM
      361 GMFTRALAYI LSHGADGLKQ VAEDAVLNAN YILRSLEDVL DAPFAASGPC MHEALFSDRG
      421 LAEGFSTLDI AKGLIDEGYH PMTVYFPLVV HGAMLVEPTE TESKAVLDQF VGALRSIALR
      481 AKNGDPALKS APHFAPRARL DETLAARKPV LRWED
//