LOCUS       AMU93322.1              1081 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-denpendent
            receptor protein.
ACCESSION   CP013342-334
PROTEIN_ID  AMU93322.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_01740"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_007663258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MQFRACGLRK IFLSGVAIGC LALSVGTAQA REGQDKATSY KIPAQPLGRA LRDFGLQSGM
       61 TIMADAMIVN GKRSGGYSDR SDPETALRVL LRGTGLGYRR EGNIFVVQPV GNETPTAAAV
      121 TDGDNEIIVT AQKRAEKIID VPIAISAFTP RALDDKKVEG GAELVRAVPN VNFSKSNFSG
      181 YDFTIRGIGT KAISASSDPA VAVSFNNTPL IRNRLFEQEF FDLERVEVLR GPQGTLYGRN
      241 ATGGVVNIIT AMPKYSFEGL AKAEVGSFGT MRLNGMLNIP LGDRFAIRGA AAMTKREGFD
      301 YNSFTNRHVN DRDLWSTRLS AQWEPSDNLK ANFVWQHFQE KDRRSRTGKQ LCTRDPGPEM
      361 VGDTPVPDHL RGKLSQGCLP GSLYSEAAFG APNATSFAFY YTAGLIDVGL LPDPVLGLAP
      421 VPIVNNLSDP YAGINQSRNL REISTSYDPV FRAKNDVFQL NLEAGLGDLK LVSQTAYARD
      481 RYYSSQDYNR FVSAPVFADS LDPRLVDVLG RPNNIPGPTP GGVYTDPQLG PSDRMLAVDV
      541 SQSRNSQWTQ ELRLQSDFSG PFNFSVGANA LNFKSQDDYY VFSNLFSLLA EYFYNREDAP
      601 GEIGTGTRNC DAGNEFRECV YVDPNPIDQI NGEGHNYFRS KNVVQTRSWA LFGETYWQIA
      661 DDVKITAGAR YTNDRKRSTP IPSQLLLGGF KFGTESGPSS GGRVSRGYPA LPPINQEWNA
      721 FTGRLVVDWS PQTSFTDDTL VYASYSRGYK GGGSNPPRVD IDPKVIQYQP LAETFEPEYV
      781 NAFEIGMKNS LAGGKVMLNA TAFLNLYKDY QVSQIVDRIS LNENFDATTW GLELEAAWQP
      841 SRNFRVDSNF GYLRTRIGKG EQSIDVMNRT QGNPDWVVVR PQLGVPSNCI APKDKVEAIL
      901 SSFFAGPGGL GDFMLSALCA GSARYGSFNP NVETNLRWDQ FLGFTYDPLI DAPNGGRGFY
      961 ADLSGKELPN SPRYTFNIGA QYTVFAGEWN VTLRGDYYRQ AKSYARIYNT EYDRLRAWDN
     1021 ANLAITIERP KSQFAVQLYV KNLFNDTPIT NTFTNSDDTG LSANIFTLDP RIIGFNVTKR
     1081 F
//