LOCUS       AMU93316.1              1021 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-328
PROTEIN_ID  AMU93316.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_01710"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003039915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MRAITIAKLA LLCGPSLLAA TVAQAQEPLT AETAADQSAD QPAPPADANE AIVVTGSQIQ
       61 GAKINDVLPV TVLDETAIEN TGASSGDELF RAIPQAGTVA FNEQNSSTVN NVRGDVGSIN
      121 LRDLGTGNTL LLINGRRMTL HPGFQTELLV PVVSSDTNEI APGSVKRLEV LRDGASAIYG
      181 ADAVAGVINT VLKGDMKGGF LEGDWRASDG TSLYSYQISG GYGFDFGGGR GNLTVYGGYF
      241 YENGLSNAAR DYAADDNRLP LVEGTDFEGD ASFNNRNTFG PFGQFDIQGS SPSSRTPIGD
      301 DDFYLQPSSF PGCKMDFGDG LCARNGTTPT TDVRYNTIYG NSLISQKRRY NAMALLSYEL
      361 SNNVEAYFEG SFYRSENNRQ LDASAILSAV PVGISKNAYW NPFGPVGSPN RLPGTTIAAS
      421 GVDVIMERYR FVDVGNRDVS VDKNVYRLVG GLRGNIGAWD FDTGFVYSEA KLNDVTRNRV
      481 SLTLMQNQIN LTTPDAYNPF NGGCVTSDPG IGDCTPNPDS SIDPFRIDVY RKGGTSLALG
      541 DFKISRNDLL SLPGGDLGIA AGVEWRRETF YDDRDPRLDG TITFTDSVTG EVKGSDVAGT
      601 SPSPDTSGSR EVYSAFAELL VPVVSPEMNI PLINRFDVQL AGRIEHFKDI DETAAVPRIA
      661 ASWSVFSGVT FRGAWSRGFR APNLVQVNDA GTTRSNTRDD FVLCQAQLEK GLISSLGSCT
      721 GAGTISYRSG TENLKPEDST SINLGIVLEP RFIPGLTLTA DYWRVKQTGL VGTFGDDNAI
      781 ALDLLRRLNG SSNPNVIRAD PTAEDIALFT GTSLAPAGKI TQVLDPYLNL DSRVSKGWDF
      841 GLFYKVPDFG MGKFRLSLNV AHLMSFVQSA GPDGQEIIDG IASGVLPLDV TVGGLGELVE
      901 IEGRPKWRAT GAINWGSGPV DIGLFGQYTG KVYDTSVIRD VLIDSDDPNA NYYPVHDQFT
      961 LNLSVAYTIK NDTPLDGTRL RFAINNLFNE DPPLADEDYG FFSSLYTARG RVFHVELRKK
     1021 F
//