LOCUS AMU93299.1 643 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 amidohydrolase protein. ACCESSION CP013342-311 PROTEIN_ID AMU93299.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_01625" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_007712954.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MNPITRRQAL AGAATTALLS SSESFAMSPK DLIIVNAKVT TLDKGNPVAE AVAIRDGKFL 61 SVGGEQAVRA AAGPDATVID AKGRRLIPGL IDSHIHVIRG GLNYNMELRW DGVPSLAEAI 121 AMLKRQAENT PPPQWVRVVG GFTEHQFAEK RLPTLDEINA AAPETPVFIL HLYDRALLNA 181 AALRAVGYTK DTPNPPGGEI VRDAAGNPTG LLLAQPNATI LYATLAKGPK LPEEYQLNST 241 KHFMRELNSL GVTSVIDAGG GFQNYPDDYQ IIEKLHQDGE MTLRIAYNLF TQKPKEELKD 301 FATWSTQVKP GDGDDTYRHN GAGEMLVYSA ADFEDFRVER PDMPANMESD LEPVVRLLAE 361 RKWPWRLHAT YDQTIGRALD VFEKVNKDIP LQGLNWFFDH AETISERNID RIAALGGGIA 421 VQHRMMFQGE YFIERYGAKA AEATPPIKRM MEAGIPVGAG TDATRVASYN PWVSLSWLVT 481 GKTLGGTNLY PVRNRLDRET ALRLWTEKNT WFSNEVGKKG QIKAGQLADL ALLSDDYFSV 541 AESEIVHLRS VLTILGGKIV HGEGDYGPIA PTLPKPMPDW SPVATFGGYH RRPEGAQKMA 601 SACGCASSCA VHGHDHAAAL GANTPAADVQ SFWGAFGCGC WAV //