LOCUS       AMU93253.1               807 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-265
PROTEIN_ID  AMU93253.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_01390"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003039841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MIPKSSSRRR VAPAAIPLTL LLLLGDDPAF AAENAADETA AADTVAGEGP QAAYGNEIVV
       61 TARRRSETAQ DVPIAISVVG GDQIDSTGSF NVGRLQQLAP TLQFYTSNPR NSAVNIRGIG
      121 APFGLTNDGI EQGVGIYVDD VYYARVASAT FDFLDVAQIE VLRGPQGTLY GKNTTAGAIN
      181 ITTNQPTFDF EGKAELSIGD LNFKQAKAAI SGPLSDRLAA RFAVSATSRR GTIYNVTTDR
      241 WIQSQDNIGL RGQLLWKPTD TLSVTLVGDW NKQDAVCCGS VFVRTGATQR PLARQYAALA
      301 VAQGYTVPST NPFDRLTDLD ANLNAGNEIG GVALRAKWDV GPGTLTSITA WRYWDWQPEN
      361 DRDFTGLPIV TKSQNPSQQN QYTQELRYNV SGDRFDFVLG GFAFHQRIDT QGTEAHGAAS
      421 SRWTLNPASA LANDPTVLDG LTARNTQYLK NTSLALFGQL SWKITDRLTV QPGARINYDK
      481 KEGYYQRLVF AGDGSPVTRA LNDPVSVARL GVFAPQEYAP SFSDWNFSYD LTATYKAARG
      541 VLVYATYART FKSGGINQNG VPTDAAGNPL LGAATIKPEA VDHYEAGLKT DYWNGKGTVN
      601 LAVFRTDIGD YQANVNNGQF GVLRGYLANA DKVRTQGIEA DVAIRPSERF NAYVNGAYTD
      661 AKYRRFVDAP CPPELSGGAN SPANCDISGA RLPGVSKWAL SFGAEANVPA SLFGQEGQVY
      721 LGYDGSYRSN FSSNASPSIY TWVDGYSLSN IRVGFRAERR LDVFAWVRNA FDRDYIDQLF
      781 VGPGNTGLIT GLPGDPRTWG GTIKFGF
//