LOCUS       AMU93182.1              1246 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 DNA transfer
            protein protein.
ACCESSION   CP013342-192
PROTEIN_ID  AMU93182.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_01015"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_013846838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MCSRFLSALI AALAATVPTA ALALETSFHT YDGFNETVDA FRLVSMIFAD PRYETLVLIV
       61 AVAGIALGAL LASVRGNGMG IVAFGFQTLV GIGLFVGMVA TTGTVHVYDR VRNAYQPVGD
      121 VPNLIVLVAG VTNMMERAIA ETIDDNTIDP NAKLEFGAGG HSFDLFLNAV SPRGPMTDTF
      181 LDATIKDYVR QCYPVARVSP AYGIDDDQLF RTTNDLPAAF AAMSGPATFS TVFTATDKGG
      241 TTVSCTETWT HISDRLSDPS LFHGYSQQVC ERTGYDVSNA AQLQRCRSNL GALGDKMLAT
      301 PLTLQQLMTN INLGNAVGDV LFEDSPATAA RVMANRAVVS SGLATMSTAN EWMPTIRATV
      361 FGIMLFMMPI ALLFILTPIN LRVASFALGL FVFVAMWGVI DAGIYQLTLG RAMDVLAEMR
      421 SNHVAANAWM LAPGSAMKAL AIFGSFRTAA AGLAGAFVFT VFRFSGNVFT SFTSGALGVQ
      481 GQGTAAATPI MTHEGRAQAL EAQASATGTT ARRSAASSFG DFGERSTFGT NRAFGAAGGY
      541 LSDRTPGAPG ATGFGLGVTD AARELGGLAP ALVGRDLTHP ATAAAVRANA TTSAIHNFAE
      601 KDALRSLGTS YFGPGQAGER AFAGFAQNMV QWKAFGDTRA YDMMMRGAQR HFERNGYDQK
      661 DAALKASTVI AQASADPTFA KLIANTYDQE AMLRNDLTAA QVNVGAMEGR RDYAGDNVAG
      721 IERRNVATEQ AWRTGNNEGQ RNSASMLGLS IDETSRRIGF INTLSGEARS SAITSLSRAT
      781 GRNEAQVMRA LETYNASVQL GTADGATAEA AREGTSVYGR TREAAGYDFA ERSGKLDAQR
      841 EVGHDGVRGA ARIGEQRRQS DNFGFAEGAA AAGVSTREAA RLDAFIQALS RTAGNQVDMA
      901 EGGAAGIADR ARNERLTRIV DNERLTRMQG LLRSEGINMT KRELAMAQNG DLNLNVSPDV
      961 ARQLRAAGLI NDSQYGTIAE GGRARFSFAD NDLLVSSSTG FTQSARSDTS TKYEAGKQAG
     1021 PDTIENMLSS GPEGQAMMAN WLRGGFEMDR NGEWRLNPQV ADTLQRDVSA IMAQTGWQRA
     1081 ISRSAQDQIS MGTAVGGNVG ASAQSSDYAS RGGPAKGKER SQTATSGSVG GSLGYSSSDM
     1141 GTSNETARAS LDIVNYDVRE AISAAERAAA RSANPEMTFT SELNRQVLGP EGLRNRYLGQ
     1201 ADSARGTADI TGPMTSLEQS SILSSGRFST DLANGPFDGD SSYKKR
//