LOCUS       AMU93152.1               978 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-161
PROTEIN_ID  AMU93152.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_00850"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_011415903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MNKKAYWLAS AVVMALPQVS NAQEVIAEEP DGGDNVIVVT AQRQAQSLQD VPIAVSAFSA
       61 EALESQQIEN ASDLQLTLPN VSFSKGNFTS ASFTIRGVGD LCVGVTCDAA TAIHVNGSPL
      121 FGTRLFETEY FDLERIEVLR GPQGTLFGRN ATSGVVNVVT AKPKLSRFEA EAQFEYGNFN
      181 SIEARGMVNV PIGDMIGVRL AGIYVNRDGY TTNLYDGSDI DARDLYALRG SLRFEPGPDT
      241 TIDLMGYYFR EKDTRLRNQK QTCQRDPLGV LGCLNNRRDF DTTNANSTVG ATLSSSEFFA
      301 IQGIPAVLGL GSLYGPDGFS GFQEPGDVRV VNTAYTPFYF AEELQVQARL EQKFGAMTLT
      361 ATGIYQDTEV DSRQDYFLGI QSRAGFAPAL NTLDFFAANG LPTGLAPPAP AFIPGSSAYF
      421 SPIAGALIPD GPQGVLCTSD NDDGSRGAFE GNSLCSETPL SFDRSSEQRE SWSGELILTS
      481 DFDGPFNFLL GGIYAKSKTT DNSYYVNSFA LDYASAVLGS FGSLSGGLPP SYFATSMYRN
      541 NSLESNLESY GIFGEVYFDL SDRLTLTGGL RYNNDKKDVT ARTTLISFLN PYANDGDPFD
      601 TPITPLTGPS GLFDADPGTP GQQLAQFREV SFDEITGRAV LAFEVTPDNS LYASYSRGYK
      661 SGGINPPLSP IFAVSESFGS ETIDAFEIGS KNVFANGALQ LNATAFYYKY SGLQLSRIVA
      721 RTSVNDTVDA NIWGVELESV IRPDPNWLIN LSFSYLNAKV AGDQFFSNPR DPGGGDPDAV
      781 IIKDISNGAH CAVTGPAPGV ADAFVAGVNA ALGLRAPQEF PSDGNIASSG AFGICGVLAS
      841 AIPANSGIQV LSPGVEVNIK GNTLPQAPNV KVSMGVQYTA EVGNGMTLVP RVDISMTGKQ
      901 YGNIFNGRIN RIQPFVQANA VLQLNGADER WFVRGFVQNI FDSNSVTGLY VTDASSGNFT
      961 NIYTLDPRRY GVAIGAKF
//