LOCUS       AMU93102.1               861 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 restriction
            endonuclease subunit S protein.
ACCESSION   CP013342-109
PROTEIN_ID  AMU93102.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_00575"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_011087775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MDASEYKEYI FGVLFLKRCS DLFDQQREKL RTDLRGRGLD GDRLNAMLEN PDQYTFYVPE
       61 ASRWETVRHL KEDVGNGLNA ALGELERHNK DQLEDVLEHI NFNKKIGQRT LSDDTLVDFI
      121 QVFEKIPLRD ENFEFPDLLG AAYEYLIKYF ADSAGKKAGE FYTPADVVRT MVEIVDPQPG
      181 MSVYDPTVGS GGMLIQSRDY IRDNGGDPNN LTLAGQESQG TTWSICKMNM ILHDIQSAKI
      241 EQEDTLTKPQ HRDDNGELTR FDRVLANPPF SQNYSAKEMD FKGRFAKWMP EKGKKADLMF
      301 VQHMLAVLKS NGRMATVMPH GVLFRGGEEK DAREFFITQG WLDAVIGLPS SLFYGTGIPA
      361 CILVMNKENA EAREDVLFIN ADREFREGKA QNFLRPEDMA KIVDVYRRRE DVPGYARVVP
      421 IKEIETEGYN CNIRRYVDNA PPPEPQDVRA HIHGGVPVAE VDALEHHWMN YPDLREACFT
      481 PRPGDTAYCD FASAITNRRD IAELVKAHPG VIATHQAFMS RLSDWWNIIQ PQMEMIARGN
      541 GQADNVYALR RGLMADISQA FSDQALLNPF QIRGGLARYV DSLKIDLKSI AASGWGAELI
      601 PDDEILQSEF PELIEELASK RARIDELQAA FAAADEEGYE DEDESGVLPS ALLSSLKAEQ
      661 TALNGQMKHL VKEAKAVLTT IKADIIARDA WPSCWTKGDF GIGGTQTKPD LDGASRTLSI
      721 ARDAEVDPFL RIPIEKLVDE GKDIESRLSD IGKQLAVHKA LDDEAKALKA DLRVAEKRRE
      781 ELVAAARAKI TPAAAQTQIL LRFREQLFAT YRAYLDADRR AVTSAIENLH DKYAVTVRDI
      841 ERQRSAAAAK LEDYLGKLGY V
//