LOCUS       AMU93100.1              1080 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 deoxyribonuclease
            HsdR protein.
ACCESSION   CP013342-107
PROTEIN_ID  AMU93100.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_00565"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_011087773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSEYAHVEAP LLTQLGALGW TVVDQGSQMI PHSPAASLRS SFRDLILPQV FRDSVRALNQ
       61 TSDGQDWLTE RQLAGLIDDI FRQPGKGLLD ANEAVHALLM KAQVDRNEVT GEKDPTVRLI
      121 DFANPERNTF HAINQFRVDT PGCIKAFIIP DVVLFVNGIP LVVIEAKIGD ANTANPMHGA
      181 FVQLQRYRDA RPETARAGLR EGEPKLFYPN LMVIRTCGEA AEFGSISSAP EHFYRWRNVW
      241 PEQYATITPP LGVVREQEEL VQGLLNPHCL LDILRTCTVF KDTDSGKRVK VLARYQQHRA
      301 ARRIVERLRT GQAPMERSGV IWHTQGSGKS LTMVFVGRML RASRDLNDMK ILMVVDRADL
      361 EDQLTGTARL IGGKINLVES RAAVRDVLSS PASDVNMVMV HKFLETKDDL PDSFREKLGR
      421 YAPPPSAESF GVVNASERIL IMVDEAHRTQ GSDMGDNLFE AFPNAARVAF TGTPLITERH
      481 AGRQTVKRFG EYIDKYKLMD AVADGATLQI LYEGRTANTA LRDKAEFDQA FEDLFAERSA
      541 EDLLAIKKKY GATGDILEAE SRIGAIARDL VGHYIDNILP NGFKAQVVCH SKLAAVRYQR
      601 ALREALAERL ERETDPEAKR RIAFLKVAVV VSSDATNESA EITAARREAR ESNAVENFCK
      661 PFNLDDYDQA NTGIAFLVVC DMLLTGFDAP IEQVMYIDKR LKEHNLLQAI ARVNRVTHGK
      721 QRGFIVDYIG FAGHLTAALK IYADQEPEDL KAGFQNLTSE LPILEERYRR LLQHFQGLGV
      781 HDIEAFLTGT LASPEDDVRV VHKAVDALER IKARADFEVY LKKFLMSLDL ILPGAAAHRY
      841 RGPARRLGYL MRMAKERFKD DSIDFAGVGQ KVAALINKHL IELGVDPQIP PVELLDPDFV
      901 EQVTGHAQGS TRAKASEMEH AIRKHCTIHF DEDPAFFKRM SEKLDTLIAK HGDDWKLLAE
      961 AYEGLRADIR AGRGKGDAEQ PAEVAVFKDN LFALIGDSAT LSLEDAAMLD ALSSRLVSLI
     1021 RDAIAIVDFW RKPDQVRRLR ANIDTELMVS GISAVQDHHQ RIAVELTKLA EKRHVELLRP
//