LOCUS       AMU93079.1              1116 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 hybrid sensor
            histidine kinase/response regulator protein.
ACCESSION   CP013342-85
PROTEIN_ID  AMU93079.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_00445"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003039614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSLQSAALLA LAMILLLFVI AALVETRGAA LARRPALRHR AYTLALGVYC TSWTFYGAVG
       61 SAVRDGWSYL PIYAAPMLLL LAAPRFLRRL SEAVHEEQAT TVSDFIAARF GHDVVVARLV
      121 TVIALLGTIP YIALQLRSIG AALSIVSGAE VAAQAMLVAA PLLALFAILF GARRFELAGR
      181 SEGLLYAIGL ESAIKLLALV AVAGVAVAVL AATPPQRVIE GFSALQSRFE PQGLTLNVAI
      241 IFLIAMPAIL SLPRQFYMGL VEARQPDDLV RARFGLAAYL GTMAIVVLPI ALAGLTVLGP
      301 AIAPDVYVLE LPAAEGFGFV LAAALLGGVS AAASMAIVDS TALATMVSND LVFPTLMRAP
      361 ATTESGAIGR RMLTIRRLSI LAILTMGLVW ALLVSAQDSL ASIGLIAFAA MAQFTPHLIL
      421 AATGKGRDSL AARASLSVGL ALWLYTLALP PVVPTAWLDA LAGTAIDPLR LLGIGGAAPL
      481 SHGVIWSVGA NLIVYAAIAA RKVQTPPLPR FVRAQRPITN LADLAQLTGS FVGEEQAGKA
      541 FPGADRSHPV DRQAAQRARE LIAQVVGASS ARALVASALA GGQLSFHEVT RLLDEGGQSL
      601 RFSRRLLAAT FENVGAGISV VDADLNLVAW NSRYLELFNY PPGLVRVGVP VADLIRHNAE
      661 QGDFGPGDVA HHVEKRLEHL RRGQEHSVER HRNDGRVIKI VGGSMPGGGY VMSFTDISEE
      721 ARMREELRRT LEELEQRVTD RTRELSDANR RLARTDQDKT RFLAAASHDL LQPLHAARLF
      781 TAALGRDASA AQHDLIGRVE SALVAAEDLL RSLLDISRLD AGGVTPEPAA IALAPFLGDL
      841 AETFRPMAEA KGLRLRIGAM PGTVESDAGL LRSVMQNFIG NAVRYTARGG VLIGVRRRGA
      901 DWRIDVIDTG VGIAEAQIED IFSEFVRLGE VEVEGLGLGL ALVRRIVRLL GGRIEVRSAP
      961 GRGSRFSLYL PAAESGEAPT AFPKIAATGD RAPQSLRVLA VDNDERIVEA SLALLARMGH
     1021 DAVGARGPGD ALSAPGRFDA ALVDYQLDDG ANGLDLIAQL QMQHPGLPAL LVTAENGAAM
     1081 RARAAELGVT ILAKPVAAGA IEGFLTALSV REIEPE
//